| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1685 |
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| Symbol | |
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| ID | 5539161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2167330 |
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| End bp | 2169882 |
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| Gene Length | 2553 bp |
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| Protein Length | 850 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640893822 |
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| Product | kelch repeat-containing protein |
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| Protein accession | YP_001431795 |
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| Protein GI | 156741666 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00000259319 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTCATA CGACCCGTCT GTCGGGCACG ATGCGCGTGC TGATGTTGAT CGCTGCGTTG
TTGACTGCTC TCGCGATCAT CCCGTCCGCC CCGGCGGATG CCAGTGTGAT CAGGTTTGTG
GCGCTCGATG ATACGCAACC GGAGTTTGGC GCCGGCGCGC GCATTCTAAC GTCGGTCGTG
CCTTCGACTC TCAATAACGA TCCGATTCCC GGGCAGGTGA CCGAACCTTA CGCCGGCGCC
AAAACCGGCA GTCAGGGCGC ACTGGCGCTC GCCGCCATTC GCGCTCTCCG CTGGGGGCAA
ATCCCGGATA GCCCGCTCCC GGCGGCGCGC ACCGAAGTCG GCGCGGCGGT GATCGGCAAT
ACGATCTGGG TGGTTGGCGG ATCATCAGCA GGTGGAACGA CCTACCACGA TACCGTCTAC
CGCGGCACGG TCAACACCAA CTATGGGCAA CCCGGCGCCG GCGTGATTAC GTGGGCGACG
TCCACACCGT TGCCATCGGT CAGCCACTGG GATACGGCAC CGTACAATAA CTCGCTCTCA
GCGCGCACCA ACGCCGCCGT CGCCGCGCGA CGCACTGGCG GCAATGCCGG CAATCTGTAC
GTCATCGGCG GCGCAGTGGC CCCCGGCAGC ACGTTTTCCA GCAACTCGGT GCTGGTCGGC
GATGTTGATA CGAACGGCAA CCTGACGTGG CGCAACCCGT CATCGCCTTA CCGTCTACCT
GCCACTGTCG GGCTTGAAGG CGCGCGCGCG TTCGTGCATA CAACCACCGC AGGCAAAACC
TTCCTCTACG TCGTCGGCGG GATCAAAGAT CAGGCAGGAC CTACCCCTCC GACAATGTCA
AACGTCGTCT ACTACGCCGA GATCAACGCC GACGGCAGCC TGAGTCTCGG CAGCAACAAT
CGCACCTGGA GCCAGACGTC ATTGCCGGCG GGGGTGAGCG ATACTGCCGT GACCGTCGGG
CGTTACACCA AAGACGACGG AACCGTTCAG GATATGTTCT TCATCTACGG CGGGCGAAAT
AACGCCAGCA ATGAGAACCT CGACACGAAC ACCGTCCTCA AGGGAGTGAT CAATCCGACC
ACCGGCGCGA TCACGTGGGA GGACAGCACG ACCGGAGGAA ACGCCGTGCT CCCTGCCAAC
CGCAACGGTC ACGGCGCCGT CGAGTTCAAC GGCTCGATCT ATGTCATCGG CGGGCGCACC
GGCGGCACAA TCAATCGTAA CGGGTATGCG TCGTATATCG ATCCGACCAA TCTTGGTCTC
TTCAAGGACG GGACGCTCAA CTTCTATCAG GACGATTTCG GCGCGCTGCC GTCCTCTGCC
GCTCCCGGAC GGCGCAACCC GGGTGTCGTG CTCGTGCCGA CGAGCAATCC GAACTACGCC
TTCGCATATC TGATCGGCGG GACGGACGGC AGTGCACCTT CCAGTCAGGT GTTCCGCGCA
ACCATCGGAC CCAGCGACGA CCAGACCTTC TACCCGACGA CCGGCTACTA CTACTCGAAG
CCCTTCTCAA TGCTCGACCT GGTCAATGAG CAGCAGGCGA CCGTGCGCAA GATGACGTGG
CTGACCAACA TTGATGCGGC GAACGGCGGC GACATCCGGC TCGAATACCG CGTCTACTCG
CCATCGAGCG GCAACTGCAA CGACACCGAA GGCGGGTGGA GCGAAGTGAG AGACCCTGAC
GCGGGGAGCG GGCGCTTCTC GAAATTCAAT CCATCCGGCG CTGCGTATGC AATCAATACG
CAAGAATATG GCGAGGGTCA ACGATTGCCG CCGGGCAACT GCTTCCAGTA CCGCGCCACC
TTTACGCGCG GCACGGCGCA GAACGCTTCG CCGGTGCTCT TGCGCCTTGG CATGGAAGTC
ATCATTCCCG GCAACCCGGA CCTCAACTGG CCCAACAACG CCGTCACCAC GACCCAGAAC
GCCGACAACA CCACGCGAGG GGTTGAGGTG CGTCTGCGCA ACCAGAACCA GATCAACCCG
CCGACCCAAC CGGCGAATGT GTGCCATGCT TCGCAACCGG GATGCAACCC GGAGGGCACA
TTCTACGTCG ATGTCTTCAT CTTCCCGCCG GGCGTCACGC CGATCATGCC GACGCTGCCG
CTGTTTGCGC CAGGCGGCAA CAGCCTGAGC AACCCGGCGC TCGCGCCGTA CCACCGCGCC
TGTCTGCAAA TCCCGAAATG GGTAATGCAG AAGGATGTCA CCTTTACCAT TGCCGAAACA
TTCCGCTGGA GCGACATCAA GACGGTGGGC ATCGATGGGT GCGTCTCCGC CGCGACGAAC
GCCAGAAACA ACACCGGCAA AATCTTGCGC GATTTCTTCG ATCAGGGCAG CGGAACATAC
AAAGTCATTC TGGTGGCCGA CTCGCACACC GACCTGAAAG GACTGGTCTA CGAGTCGGAC
GCGGCGGACG GCAACCATCC GGCAGAATTG AACAACGTGA GCGCCATCTT CGACGTGCCC
TTCGTCGCCG GCGGCGCACC GCCACCAGAC GGACCCGCGC CGCCGCCGGA CGAACCGCCC
ACCCGTGTCT TCCTACCGCT CGTCATGCGC TAG
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| Protein sequence | MTHTTRLSGT MRVLMLIAAL LTALAIIPSA PADASVIRFV ALDDTQPEFG AGARILTSVV
PSTLNNDPIP GQVTEPYAGA KTGSQGALAL AAIRALRWGQ IPDSPLPAAR TEVGAAVIGN
TIWVVGGSSA GGTTYHDTVY RGTVNTNYGQ PGAGVITWAT STPLPSVSHW DTAPYNNSLS
ARTNAAVAAR RTGGNAGNLY VIGGAVAPGS TFSSNSVLVG DVDTNGNLTW RNPSSPYRLP
ATVGLEGARA FVHTTTAGKT FLYVVGGIKD QAGPTPPTMS NVVYYAEINA DGSLSLGSNN
RTWSQTSLPA GVSDTAVTVG RYTKDDGTVQ DMFFIYGGRN NASNENLDTN TVLKGVINPT
TGAITWEDST TGGNAVLPAN RNGHGAVEFN GSIYVIGGRT GGTINRNGYA SYIDPTNLGL
FKDGTLNFYQ DDFGALPSSA APGRRNPGVV LVPTSNPNYA FAYLIGGTDG SAPSSQVFRA
TIGPSDDQTF YPTTGYYYSK PFSMLDLVNE QQATVRKMTW LTNIDAANGG DIRLEYRVYS
PSSGNCNDTE GGWSEVRDPD AGSGRFSKFN PSGAAYAINT QEYGEGQRLP PGNCFQYRAT
FTRGTAQNAS PVLLRLGMEV IIPGNPDLNW PNNAVTTTQN ADNTTRGVEV RLRNQNQINP
PTQPANVCHA SQPGCNPEGT FYVDVFIFPP GVTPIMPTLP LFAPGGNSLS NPALAPYHRA
CLQIPKWVMQ KDVTFTIAET FRWSDIKTVG IDGCVSAATN ARNNTGKILR DFFDQGSGTY
KVILVADSHT DLKGLVYESD AADGNHPAEL NNVSAIFDVP FVAGGAPPPD GPAPPPDEPP
TRVFLPLVMR
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