Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1683 |
Symbol | |
ID | 5539159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 2164616 |
End bp | 2165908 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640893820 |
Product | response regulator receiver protein |
Protein accession | YP_001431793 |
Protein GI | 156741664 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00000786383 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAGGAG GACCGCGAAC CCCCGACGCC GCAGGTCCGG CAAAAATCCG GGTGATGATC GTTGACGATA TCGCCGAAAC ACGCGATAAC ATCGAGAAAC TCCTCTTCTT CGAGAAAGAT ATCGAGGTCG TCGCCAAAGC ATCGACCGGG CGCGAAGCGC TGGCGCTCGC CAAACAGCAC CGTCCCGACG TCGTATTGAT GGACATCAAC ATGCCGGACA TGGACGGGAT CGCGGCGACC GAGGCGCTGT TGAGCCAGGT GCCCGAAGCG CAAGTCATCA TGATGAGCGT GCAGGGAGAG CAGGATTACC TGCGCCGCGC TATGCTCGCC GGCGCGCGCG AATTCCTGCC CAAGCCCATC GGCGCTGAAG AACTCTACAG TGCAATCCGT CACGTCCATC GCCTGGCAAG CACCCAGCGG CGTTATATCA CGACGGCGCC GCCGGGAGCA GGCGGATCGG GTGAGGATGA AGGCGCACAC GGACAGGTTA TTGCGGTCTT CAGTCCGAAA GGCGGCACAG GCACATCGTC AATTGCCTGC AATCTGGCAG TCGCATTGCG CCTGCTGACC AACAAGAAAG TCGCGCTTGT CGACGGCAAC CTGACGTTTG GGGATGTCGG CGCGATCCTG AACCTGGTGT CGTCCAAAAC GATTGCCGAC CTGGTCAATC GTATCAGCGA ACTGGACCGC GACCTGCTCA ACGATGTGAT GGCGACCCAC GCCTCGCAGG TGAAAGTGCT GCTGGCGCCA CCCAATCCAC AGACCGGCGA ACTGGTCACA TCGGATCATC TGCGCGCGAT TCTGGAGATG ATGAAGAAAG AGTTCGACTA TGTTATCGTC GATACACAGG CATCGTTTCA AGATCGTGCG CTGGCGGCGC TCGATATGTC CGACCGGATC GTGGCGCTGA TGACCCTCGA AATCCCGTGC ATCAAGAATA TCAAACTGTT CCTCGAAGTG GCAGAACTGC TGGAGTATCC CAAGGAAAAA ATCGTTCTGG TGCTGAACAA AGCCGATAAT CGGCTCGGTA TGCGCGTCGA GAATGTCGAA GCGAATATTC AGCACAAAGT TGCGCTGCAA ATTGCCAACG CCGGTCACGA AATGACGCTG GCGGTCAATC AGGGAGTGCC GCTGGTCATT TCCAAGCGCG ACCTTCCCAC CGCAAAAGAT ATTGTGGCGC TGGCGAAACT GCTGAGCAGC GGGCTAGCGG CGCAAACCGC CACGACGGCG AAGAAAACCG AGAAAGCGCC CGAGAAATCA GGGCTGTTTG GCAAATTACT GGCGCGGCGC TGA
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Protein sequence | MAGGPRTPDA AGPAKIRVMI VDDIAETRDN IEKLLFFEKD IEVVAKASTG REALALAKQH RPDVVLMDIN MPDMDGIAAT EALLSQVPEA QVIMMSVQGE QDYLRRAMLA GAREFLPKPI GAEELYSAIR HVHRLASTQR RYITTAPPGA GGSGEDEGAH GQVIAVFSPK GGTGTSSIAC NLAVALRLLT NKKVALVDGN LTFGDVGAIL NLVSSKTIAD LVNRISELDR DLLNDVMATH ASQVKVLLAP PNPQTGELVT SDHLRAILEM MKKEFDYVIV DTQASFQDRA LAALDMSDRI VALMTLEIPC IKNIKLFLEV AELLEYPKEK IVLVLNKADN RLGMRVENVE ANIQHKVALQ IANAGHEMTL AVNQGVPLVI SKRDLPTAKD IVALAKLLSS GLAAQTATTA KKTEKAPEKS GLFGKLLARR
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