| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1678 |
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| Symbol | |
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| ID | 5539154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2158350 |
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| End bp | 2160434 |
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| Gene Length | 2085 bp |
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| Protein Length | 694 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640893815 |
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| Product | hypothetical protein |
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| Protein accession | YP_001431788 |
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| Protein GI | 156741659 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000109442 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTGCAAC ATCTGGTTGA TCGCTCTATC CGCATGGTTT TCGCTCATCT ACGCCGCAAC
CGCCTGATAG CCGCCGCAAT CTTCACCGCG CTGCTGCTCC TCTACCTGCC GACTCTCACG
CGGGTGCATA CGTTCGATGC GTTGTCGTAT GTGACGAGCG TCGAACGCAA GCCATGGACG
GAGTTGTTCC ACCCGCACCA TCTGGCGTAT GGTCCGCTCG GTTCGTTGAT GCTGACGTTG
AGCCGCGCCC TGGGATACGA TAACGGCGCC GCGTTGCCGA TGCAACTGGT GAATGCTGTT
GCAGGAGCGT TGGGAGCGGC GCTCTTCTAT CTGACCGTAT GCGCGGCAAC CGGACGCGAT
GATGTGGCGC TGCCGGCGAC GTTGTTGTTG GGTGTGGCGT ATGCCTACTG GTACTACGCT
ATCGAGATCG AGGTCTATAC GCTTGCGACG TTCTTTCTGA TCGTCTGTCT GGCGTTGATG
ACCCGCCCAA CACCCTGGAC GGCGCGCCGC TGCCTGGCGT TGGGTATTGC ACAGGGTGGC
GCGGTGCTGT TCCATCAGAC GAATGTGTTG CTCTGTGCGC CGATTGTATT GAGCGCCCTG
TCCGACCTGC GCACTGCCTG GAAACCTGGC AGTGCGCGCG CGGCCGTCGG TCGCTGGAGC
GGGTATGCAG TCGCGCTGGC ATTGATCGTG GCGATGCCCT ACCTCTACGC CATGCTGGTC
GTCAGCAATT TTCGCGCGCC TGCGGAGATG CTGGCATGGC TCACGGAGTA TGCGCGCACC
GGATGGTGGG GCGGTCCGCT GACGGTTGCA ACGATTGCCG ATCTCGGCGC CGGTCTGAGC
GACACGCTGG CGCAACCAGG GGGCGGCTGG TTCTACCTGG CGCTCGGCGG GGTCGTGGCG
TGGGCGTGGG GCAGGCATTC CCAAATCCCG ACCGGCGAGC AGGATGATGC ACAGGGAAAC
CGGGTCGCGC TCACGCCGCT GATCGCCTGG CTCGCAACGT ATGGCGCATT TTTCGCCTGG
TGGGAACCGG ATAATATCGA GTTCTGGATC GCCAGTCTGC CGCCGGCATG CCTGGTGTTT
GCCGCAGCGC TCGCGCGGGC GCGCTGGTGG AGCGCACCGG TCTGGACATC CCTGGCAATT
GTTGGAGTCA TTGCGTGGGG CAATTATGGT TCTATCGTCC GGCGTGGCGA TCCGTCAACT
GACCTGCAAC GCCTGATTGC GCGTGAACTG GCAGCGCGCA GCACACCGGC CGATCTGTTG
ATTGTTCCTG ATGGATTGCA GGAACTCTAC CTGCCCTACT ATGAGCGCCG CGAGAACTTT
CTGTCGCTCA ACCAGGCGCT GTTCGACAGC GGCGGATCAT GGGATGACGC CTGTGCGACG
ATCCGCAGCC GGATTGCCAC GGCGCAACGC GCCGGCGCGG CGGTGCTGAT CGCCGATGAA
GCGCTCCATC CGCCGCCACG GGTGCTGAAC CGCCACGGCA TCGCGCAAGC GCAGGTGGAT
GGATGCTTTG CGCCATATCA CGCAACGCTG GTCGATCTTG CGTTGGCCGA ACCGCTTCCC
TCCTACCGGC GGCTGCCTTC CGCAACTGAA ACGGCGCTGG CGGGCGGATG GGTCTTCGAG
CGCGATGCGA TGGGCTGGCA GGCGTTTAAC GTCGCGGGTG AACGTCTTGA TGGGGGATGG
CGCTTCCGTC CCGGCATCGA CCCGGCGCTG CTCAGTCCGC TCTTGAACCT CGATGCGCGC
GAGGTGACTG CCATCGAGAT TCGGATGGCG AACGGCACGC GCGCCCGCGA CGCGCAACTC
TTCTATGCCG GAATCGATGG CGCGTTGACC GAGGAATATT CCGTGCGCTG GCAACTGGCA
GAGACAGCCG AAGCCGTAAC CTACGTCATC GATCTCCGGG AAGCGTCGGG ATGGCACGGC
ATAATCACCC GCCTGCGGTT CGATCCGGTT GGGATGGGTG ACGACGGCGA GATTCGCGTC
GAATGGGTGC GTCTGCGCCT GGCGACGCCA TCGGGGAAGC AGGCGCTCGC CAGTGTCGGT
CGCCTAAGCT CGACTTTATC CATCTGTGCC GCTCACGCAG CATAG
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| Protein sequence | MVQHLVDRSI RMVFAHLRRN RLIAAAIFTA LLLLYLPTLT RVHTFDALSY VTSVERKPWT
ELFHPHHLAY GPLGSLMLTL SRALGYDNGA ALPMQLVNAV AGALGAALFY LTVCAATGRD
DVALPATLLL GVAYAYWYYA IEIEVYTLAT FFLIVCLALM TRPTPWTARR CLALGIAQGG
AVLFHQTNVL LCAPIVLSAL SDLRTAWKPG SARAAVGRWS GYAVALALIV AMPYLYAMLV
VSNFRAPAEM LAWLTEYART GWWGGPLTVA TIADLGAGLS DTLAQPGGGW FYLALGGVVA
WAWGRHSQIP TGEQDDAQGN RVALTPLIAW LATYGAFFAW WEPDNIEFWI ASLPPACLVF
AAALARARWW SAPVWTSLAI VGVIAWGNYG SIVRRGDPST DLQRLIAREL AARSTPADLL
IVPDGLQELY LPYYERRENF LSLNQALFDS GGSWDDACAT IRSRIATAQR AGAAVLIADE
ALHPPPRVLN RHGIAQAQVD GCFAPYHATL VDLALAEPLP SYRRLPSATE TALAGGWVFE
RDAMGWQAFN VAGERLDGGW RFRPGIDPAL LSPLLNLDAR EVTAIEIRMA NGTRARDAQL
FYAGIDGALT EEYSVRWQLA ETAEAVTYVI DLREASGWHG IITRLRFDPV GMGDDGEIRV
EWVRLRLATP SGKQALASVG RLSSTLSICA AHAA
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