Gene Rcas_1670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1670 
Symbol 
ID5539146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2150390 
End bp2151466 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content60% 
IMG OID640893807 
Productrod shape-determining protein MreB 
Protein accessionYP_001431780 
Protein GI156741651 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1077] Actin-like ATPase involved in cell morphogenesis 
TIGRFAM ID[TIGR00904] cell shape determining protein, MreB/Mrl family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00618582 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGGGTTCA ACCCGCTTAA CTCGTTTTTT GGCGCACTCA GTCGCGATCT TGGCATCGAT 
CTCGGCACTG CCAATACCCT GGTTCACGTG CGTGGCAAAG GGATCGTCAT TAGCGAGCCA
TCAGTTGTTG CCATCGACAA GAAAACCAAG GAGGTCAAAG CCGTCGGCGC AGAAGCCAAG
GCGATGGTTG GCAAAACACC CGCCAACATT ATCGCGGTGC GCCCGCTGAA GGACGGGGTC
ATCGCCGATT TCGAGGTCGT CGAAAAGATG CTGAAATACT TTATCAGCAA AGCGCACGAC
CGATCACTCG GTATTGTGTC GCCGCGTCCT CGGGTCGTTG TTGGTGTGCC GTCGGGTGTG
ACGCAGGTCG AAATGCGCGC GGCGCGTGAT GCGGCGCTCA ATGCCAGTGC GCGCGAGGCG
TATGTTGTGG AAGAGCCGAT GGCGGCGGCC ATTGGTGCGG GCTTGCCGGT CGATGAGCCG
GTCGGCTCGA TGATTGTCGA TATTGGCGGC GGTACCACGG AAGTTGCCGT GATTTCGCTC
GGCGGGATTG TGATCAATCA CTCGATCCGC ACCGCTGGCG ATGAGATCGA CGAGGCGATC
ATCCAGTTCG CCCGCCGTGA ATACAATCTG CTGATCGGCG AGCGTATGGC GGAAAAGGTC
AAAATCGCCG CCGGAAGCGC CTATCCGCTC GATGAAGAGA TTCGGGTCGT GCTGCGCGGG
CGCGACTTGC TGACCGGTTT GCCGAAAGCA GTGGAGATCT CCAGCGTCGA ACTGCGTGAG
GGCATTGCCG GTCCGGTCAA TGCGATTGTC GCTGAGGTGC GCGCTGCGTT GGAAGAGACG
CCGCCTGAAC TGGTGGCGGA TATTATGGAG CACGGGATTG TGCTCGCCGG CGGTGGCGCG
TTGCTGCACG GTCTCGACCG GCGGATCGCT GCGGAAACGA AGATGCCGGT GCACGTTGCG
GAGGACCCGC TCTCGTGTGT GGCGCGGGGC GCGGGGAAAA TGGTCGAGGA GTTCGAAAAT
CCGGTGTATC GCGATATCCT GACCAGTGCG CAACGTACCC GTCGCGTCCG TTATTGA
 
Protein sequence
MGFNPLNSFF GALSRDLGID LGTANTLVHV RGKGIVISEP SVVAIDKKTK EVKAVGAEAK 
AMVGKTPANI IAVRPLKDGV IADFEVVEKM LKYFISKAHD RSLGIVSPRP RVVVGVPSGV
TQVEMRAARD AALNASAREA YVVEEPMAAA IGAGLPVDEP VGSMIVDIGG GTTEVAVISL
GGIVINHSIR TAGDEIDEAI IQFARREYNL LIGERMAEKV KIAAGSAYPL DEEIRVVLRG
RDLLTGLPKA VEISSVELRE GIAGPVNAIV AEVRAALEET PPELVADIME HGIVLAGGGA
LLHGLDRRIA AETKMPVHVA EDPLSCVARG AGKMVEEFEN PVYRDILTSA QRTRRVRY