Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1670 |
Symbol | |
ID | 5539146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 2150390 |
End bp | 2151466 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640893807 |
Product | rod shape-determining protein MreB |
Protein accession | YP_001431780 |
Protein GI | 156741651 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1077] Actin-like ATPase involved in cell morphogenesis |
TIGRFAM ID | [TIGR00904] cell shape determining protein, MreB/Mrl family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00618582 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGGGTTCA ACCCGCTTAA CTCGTTTTTT GGCGCACTCA GTCGCGATCT TGGCATCGAT CTCGGCACTG CCAATACCCT GGTTCACGTG CGTGGCAAAG GGATCGTCAT TAGCGAGCCA TCAGTTGTTG CCATCGACAA GAAAACCAAG GAGGTCAAAG CCGTCGGCGC AGAAGCCAAG GCGATGGTTG GCAAAACACC CGCCAACATT ATCGCGGTGC GCCCGCTGAA GGACGGGGTC ATCGCCGATT TCGAGGTCGT CGAAAAGATG CTGAAATACT TTATCAGCAA AGCGCACGAC CGATCACTCG GTATTGTGTC GCCGCGTCCT CGGGTCGTTG TTGGTGTGCC GTCGGGTGTG ACGCAGGTCG AAATGCGCGC GGCGCGTGAT GCGGCGCTCA ATGCCAGTGC GCGCGAGGCG TATGTTGTGG AAGAGCCGAT GGCGGCGGCC ATTGGTGCGG GCTTGCCGGT CGATGAGCCG GTCGGCTCGA TGATTGTCGA TATTGGCGGC GGTACCACGG AAGTTGCCGT GATTTCGCTC GGCGGGATTG TGATCAATCA CTCGATCCGC ACCGCTGGCG ATGAGATCGA CGAGGCGATC ATCCAGTTCG CCCGCCGTGA ATACAATCTG CTGATCGGCG AGCGTATGGC GGAAAAGGTC AAAATCGCCG CCGGAAGCGC CTATCCGCTC GATGAAGAGA TTCGGGTCGT GCTGCGCGGG CGCGACTTGC TGACCGGTTT GCCGAAAGCA GTGGAGATCT CCAGCGTCGA ACTGCGTGAG GGCATTGCCG GTCCGGTCAA TGCGATTGTC GCTGAGGTGC GCGCTGCGTT GGAAGAGACG CCGCCTGAAC TGGTGGCGGA TATTATGGAG CACGGGATTG TGCTCGCCGG CGGTGGCGCG TTGCTGCACG GTCTCGACCG GCGGATCGCT GCGGAAACGA AGATGCCGGT GCACGTTGCG GAGGACCCGC TCTCGTGTGT GGCGCGGGGC GCGGGGAAAA TGGTCGAGGA GTTCGAAAAT CCGGTGTATC GCGATATCCT GACCAGTGCG CAACGTACCC GTCGCGTCCG TTATTGA
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Protein sequence | MGFNPLNSFF GALSRDLGID LGTANTLVHV RGKGIVISEP SVVAIDKKTK EVKAVGAEAK AMVGKTPANI IAVRPLKDGV IADFEVVEKM LKYFISKAHD RSLGIVSPRP RVVVGVPSGV TQVEMRAARD AALNASAREA YVVEEPMAAA IGAGLPVDEP VGSMIVDIGG GTTEVAVISL GGIVINHSIR TAGDEIDEAI IQFARREYNL LIGERMAEKV KIAAGSAYPL DEEIRVVLRG RDLLTGLPKA VEISSVELRE GIAGPVNAIV AEVRAALEET PPELVADIME HGIVLAGGGA LLHGLDRRIA AETKMPVHVA EDPLSCVARG AGKMVEEFEN PVYRDILTSA QRTRRVRY
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