| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1656 |
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| Symbol | |
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| ID | 5539132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2136317 |
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| End bp | 2137006 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640893793 |
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| Product | membrane-flanked domain-containing protein |
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| Protein accession | YP_001431766 |
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| Protein GI | 156741637 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3428] Predicted membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.125781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00365351 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACGCGA TTGACACCCT CCTGGGGCGC GGTGAGCATG TGCGCTACAT TGGTCGGCAA
CATGTGTTTG TGTTGATCGG GAATATTCTG ACCGAATTGC TGCTGATCGG CGTGTTGATC
GCCGCCGGCG TCGTCTCGCA GGTGGCATTT CCCGATAAAA TGCTGGCCGG CATGCAAGTC
GGCGTTTTGG TGTTGATCGT CTGCGTGGTT ATCAGCCTCC TTGTGCTTGG CAGCGCTTTT
CTCGATTATC TGCGCTGGTC GAATGAACAA TGCGTGGTCA CCGATCGGCG CGTGATCCTG
CTGCGCGGTA TTTTCAACAC CGAGGCGGTC GATATTCCGG TCGAGAGGAT CAACGGAGTG
GAACTGCGCC AGAGTTGGGT AGGGCGTCTC TTGAATTTTG GTGACATCGA GATCATGACC
GCCTCTGAGT CGGGCGTCAG TCAATGTCGC AGTCTGGCTC GTCCACAAGA GTTCAAGCGC
GCGATGGATG ATGCGCGCCA CGATATCGAA CGCGGCTATG CCTATATCGA TCAGCGTGAC
ATTGATGCGT ATCTCGATGT CGAAGATATG CTTCCCGATG TCGATCGCGT GTCGCACGCT
TTGCAGCGTC TGGTAGACAT GCGGGATCGC GGACTGATCT CGCGGGAAGA GTTCGAAGCC
AAAAAACGGG AATTGCTCGG TCGTATTTAG
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| Protein sequence | MNAIDTLLGR GEHVRYIGRQ HVFVLIGNIL TELLLIGVLI AAGVVSQVAF PDKMLAGMQV
GVLVLIVCVV ISLLVLGSAF LDYLRWSNEQ CVVTDRRVIL LRGIFNTEAV DIPVERINGV
ELRQSWVGRL LNFGDIEIMT ASESGVSQCR SLARPQEFKR AMDDARHDIE RGYAYIDQRD
IDAYLDVEDM LPDVDRVSHA LQRLVDMRDR GLISREEFEA KKRELLGRI
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