Gene Rcas_1647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1647 
Symbol 
ID5539123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2127360 
End bp2128802 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content60% 
IMG OID640893784 
Productcell cycle protein 
Protein accessionYP_001431757 
Protein GI156741628 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0772] Bacterial cell division membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.393395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00916142 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCCATTTT CTGTTCAACA TCTGACCATG TTCCGACGTC CGTGGCGCCT GCGCAGCGCC 
GAACTGCGGC TTCTCCTGAT TGCACTGGTC TTCTTTGCGG CCGGCTACAC ATTGGTGGCG
CTAGCCGGCG CCGACGGACC AGCCGCATCG ACCACGATCC AGGGTGTGGC GCGTATTCTG
TGGCCCTCGA TCCTGCCCTT CCTGCTCTTT CTGGCTCTGT CGCTTGGCTT GAGCTGGCGG
CTGCCCGGCG CCGATCAGAT GGTGCTCCCT CTGGTGGCGC TGCTTACCGG GCTGGGATTA
ATGGTGATCG CCCGCCTCGA ACCCGACCTG CTGCCGATTA AGTGTCAGCA GCGCGATGGA
ACACTGGCGC CCTGTTTCGC CGGGATCGAC GACCGGCAGG CGCTCTGGGT GTTGCTGGGG
ATCGCCATCT GCGCTATCGT GCTGTTCATC CCCTGGGATG ACCTGTTGCG ACGGTATCAG
CGCACCTCGT TGATGGACTG GCTCGATCAC CATCGATACG CCTGGTTGAC CGCCGGGGTG
GCGCTGATTC TAGCGACCTT CCTCTTTGGC GTCGATCCGA ACAACAGCGG CGTGCGCGCC
TGGTTCAACT TCGGTTTCTT CCTGTTTCAA CCTTCCGAAC TGCTCAAGAT CGTACTGGTT
ATCTTTCTGG CATCCTACCT GAACGAACAC CGCGAAGTGG TCGCTGCCGG TTACCGCATT
GGTCCGCTGC CGTTGCCGCC GTTACCGTAT CTCGTCCCAT TGATCGCGAT GTGGGGGCTG
GCGATGGGGC TGATTATTGC GCAACGCGAC CTGGGGGCGG CGCTGCTCCT GTTTAGTGTA
TTCCTGGCGA TGCTGTATGT GGCGACAGGA CGCGGATGGT ATGTGGTTGC CGGATTGTGC
GCCTTTGGCG CCGGTTCGTA TGTGTTGTAC ACCATTGTGG CTGTGGTGAA GACGAGGGTG
TCTATCTGGC TCGACCCGTG GGCCACGGCG CAGGGCAGCG GGTATCAGAT TGTGCAGGCA
ATCTATGCGC TGGCGTCGGG AGGCGTGCTC GGTACAGGGC TTGGTCAGGG ACTGCCCACG
GTCATTCCGG CAGTCCACAC CGATTTTGTC TTTACTGCAC TGGCAGAGGA AATGGGACTC
GCCGGCAGCC TCGCAGTTTT GGTCGCATAT TTGCTGCTGA TCTTTCGTGG TTACGCCATT
GCCATCCGTA TTCCCGGTCG CTTTCGCGGA TTCGAGCAAC TCCTCGCCGT CGGCCTGACG
ACGATCCTTG CCGCACAAAC CTTCATCATC ATCGGCGGGA ATCTGCGGGT TATTCCGTTG
ACCGGCATTA CGCTGCCATT CATCTCGTAT GGCGGTTCGT CGGTCATTAT GAACTTTCTC
ATTATCGGGC TACTGTTGCG CATTTCCGCC AGCGCGCCTA CTCCCGCGGC AGAACAACCG
TAA
 
Protein sequence
MPFSVQHLTM FRRPWRLRSA ELRLLLIALV FFAAGYTLVA LAGADGPAAS TTIQGVARIL 
WPSILPFLLF LALSLGLSWR LPGADQMVLP LVALLTGLGL MVIARLEPDL LPIKCQQRDG
TLAPCFAGID DRQALWVLLG IAICAIVLFI PWDDLLRRYQ RTSLMDWLDH HRYAWLTAGV
ALILATFLFG VDPNNSGVRA WFNFGFFLFQ PSELLKIVLV IFLASYLNEH REVVAAGYRI
GPLPLPPLPY LVPLIAMWGL AMGLIIAQRD LGAALLLFSV FLAMLYVATG RGWYVVAGLC
AFGAGSYVLY TIVAVVKTRV SIWLDPWATA QGSGYQIVQA IYALASGGVL GTGLGQGLPT
VIPAVHTDFV FTALAEEMGL AGSLAVLVAY LLLIFRGYAI AIRIPGRFRG FEQLLAVGLT
TILAAQTFII IGGNLRVIPL TGITLPFISY GGSSVIMNFL IIGLLLRISA SAPTPAAEQP