| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1635 |
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| Symbol | |
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| ID | 5539111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2112906 |
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| End bp | 2114273 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640893772 |
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| Product | nicotinic acid phosphoribosyltransferase-like protein |
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| Protein accession | YP_001431745 |
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| Protein GI | 156741616 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1488] Nicotinic acid phosphoribosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.42847 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000680031 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGCATCT TCGACAACCG TCGCCTGACG AACGAAACAT TCAAACTCGA TGCAGAACGC
ATGCGCACCG GATGGTATTC CGATAAGTAC TTCGAGAACA TCGTCGGCAT GCTCAGCGCG
CTGGCAAAGC GCGGCTACCG GTTTGGCGGC GTGTCGCCGC GTCTATCGAA GGCAAGCATT
CCGCTCAACG ATATCGATAT CGGCAATATC GAAGTCGAGA TGCAATGGTT TACCCGTCGG
CGCCCATTTT CCGTTGTTGC CGGCGTCGAT AAGGCACTGG CGATGTTGCA ACTCTGCACC
GGTTACTTTG ACGAGCAGGG TCATTTTGTC AACACCTACG ATCAACTGGA GGTCGATGCC
GTTCACGATG GAGTGATCGT GCGCTACGAC GGCGACCCGA TGAACGTTCA GCCGGTGTTG
CGCGTGCGCG GTCGGTACCG GGACTTCGCG CTATTGGAGA CACCGACGCT TGGGACGCTC
ACGCGCGCCA CACGGATCGC AACGAATGTC TACAACGTTC TGGTGGCAGC GCGCGGGAAG
CCGGTACTCT TCTTTCCGGC ACGTTTCGAT GCGCACGAAG TACAGGCCGC CGATGGCTAC
GCCTACAATA TTGCCGTTCA GCGATTCAAT CTCGACTATG GCAAAACCCT GGGCGCATTC
ATCTCAACCG ACGCGCAGGG TGACTGGTGG GGCGGGTTCG GCGGCGGGAC GATTGCACAC
GCTGCGATTG CCGCATTCCT CGGCGATACG GTTGAATGTA TGCTGGCATT TGCCGAGACC
CGTCCAACCG ATATTCCGCG CATCGCTCTG ATCGACTTTG AGAACGATTG CGTCGGCACG
GCGCTGGCAG TGATGGACGC AATGTTCCAG CGCTACCGTG AATTGATGGA CAGCGGGCAG
ACAACCGAAG CGCGGCGCTA CAAATTGTTC GGCGTGCGCC CCGACACGAG CGACAAACTG
CGCGACATCA GCGTACCGCC GCTCGGCAAC CGCAAACTCG ACATGGGAGT CAACCCGCGG
CTGGTCTTCC ACCTGCGCCA GGCAATCGAC GACGCCTGGA AACGCTGGTC GTTGCCGCCG
GAGTGGGTGG AACCGGCGCA GCAGTGGTGC CGCGATGTCA AAATTGTCGC AACCGGCGGG
TTTGGTCCGA AAAAAATCCG GCGCTTCGAG GAACTTGGAG TGCCGGTGGA CATTTACGGT
GTTGGCTCAT CGCTCTTCTC CAACAGTGAC GAAGAAGGCA CCAACAACGA TTTCACTGCT
GATGTGGTGC GGGTCAAAGT TGGCGGAACC TGGCACGACA TGGCGAAGGT CGGGCGGCGC
GCCTGCGACA ACCCGGACTT GCAGCGCGTT CAGACGCCTC AACGTTGA
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| Protein sequence | MSIFDNRRLT NETFKLDAER MRTGWYSDKY FENIVGMLSA LAKRGYRFGG VSPRLSKASI
PLNDIDIGNI EVEMQWFTRR RPFSVVAGVD KALAMLQLCT GYFDEQGHFV NTYDQLEVDA
VHDGVIVRYD GDPMNVQPVL RVRGRYRDFA LLETPTLGTL TRATRIATNV YNVLVAARGK
PVLFFPARFD AHEVQAADGY AYNIAVQRFN LDYGKTLGAF ISTDAQGDWW GGFGGGTIAH
AAIAAFLGDT VECMLAFAET RPTDIPRIAL IDFENDCVGT ALAVMDAMFQ RYRELMDSGQ
TTEARRYKLF GVRPDTSDKL RDISVPPLGN RKLDMGVNPR LVFHLRQAID DAWKRWSLPP
EWVEPAQQWC RDVKIVATGG FGPKKIRRFE ELGVPVDIYG VGSSLFSNSD EEGTNNDFTA
DVVRVKVGGT WHDMAKVGRR ACDNPDLQRV QTPQR
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