| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1627 |
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| Symbol | |
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| ID | 5539103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2100952 |
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| End bp | 2102250 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640893764 |
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| Product | glycosyl transferase group 1 |
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| Protein accession | YP_001431737 |
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| Protein GI | 156741608 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | [TIGR03087] sugar transferase, PEP-CTERM/EpsH1 system associated |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.154338 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.324472 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATTC TCCTGCTGAC CCAGATCGTT CCCTACCCGC CCGACAGCGG TCCGAAAGTC
AAGACGTACC ACCTGCTGCG ACATCTGGCA GCGCGCTACA GGGTCACACT CGTCTGCTTC
ACGCGCAATG CCCAGGAAGA AGCCGATGCC AACATCCTGC GCAACCTGGT TGCCGAAGTT
CACACCGTAC CGCTTAGGCG ATCCACTGTT CGGAATGCGC TGACTCTGGC GGGCAGCCTG
GTGCGCGGAC GCTCATGGAT CATCGAACGG GATGATAGCG CCACTATGCA TCGGTTGCTG
ACACGCCTGG TGCGCGAAGC GGAGATCGCC GGACGACCGT ATGACCTGGT GCATGCGGAT
CAACTCAACA TGGCGCAGTT TGCCGAACCG TTGCCGTTGC CGCGCCTGCT CGACGAACAC
AACGCCGTGT GGACAGTCTT TCGCCGGGTA GCGGCACAGG AACGGGGTCT CAAGCGGCTC
CTCTGGGAAC GTGAGTGGCG TCAGTTGCGC ACCTACGAGG GACGGGTCTG CCGCGAGTTC
GAGGCGGTCA CAGCCGTCAG TCACGAGGAT CGTCAGGCAT TAATCGACGC GATGGGGATA
GAGCGCCATA TTCCGGTCAT TCCGATTGCC GTCGATGCCG AACGGGAACA GCCAATTGCG
CGTCAGCCGG ATGCGCGTGG CATCCTCAGC CTGGCGACGA TGATGTGGCC CCCGAATGTC
GATGGCGTGC TCTGGTTTGC CCGCAGTATC TACCCGCTGA TCAAACAACA GGTTGAAGGA
GTGCGCTTCT TTATCGTCGG GCAGCGCCCC GTACCAGAAG TGCGCGCACT GCCAGAACAA
GATCCGACGA TTGAGGTGAC CGGCTACGTG CCAGACCCCA CGCCATACAT CGCCGCCTCT
GCCTGCCTGA TCGTTCCCTT GCGCAGCGGC GGCGGCATGC GCGTGAAAAT CCTCGAAGCG
CTGGCGCGCG GCATTCCGGT CGTTTCGACC ACAATTGGCT ACGAAGGGAT CGACCTGGTT
CCCGGCGAAC ATCTGCTGGT CGGCGACACA CCAGAGGCGT TCGCCGATGC AGTCGTTCGC
CTGCTGCGCG ACCCGGACTT CGGCGCGCAA CTGGCGGCAT CCGGGCGTCG GCGCCTGCTC
GAACGCTACG ACTGGCGCGC TGTGTGCCCG GCAATGGATC GGGTGTATGA GCGGATGAAG
AACCAAGAAC CAAGAACCAA GAACCAAGAA CCAAGAACCA AGAACCAAGA ACCGGAAACT
GAGAACTGCA AGCCTATCCA AAGCGCCGAA GAGGGCTGA
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| Protein sequence | MNILLLTQIV PYPPDSGPKV KTYHLLRHLA ARYRVTLVCF TRNAQEEADA NILRNLVAEV
HTVPLRRSTV RNALTLAGSL VRGRSWIIER DDSATMHRLL TRLVREAEIA GRPYDLVHAD
QLNMAQFAEP LPLPRLLDEH NAVWTVFRRV AAQERGLKRL LWEREWRQLR TYEGRVCREF
EAVTAVSHED RQALIDAMGI ERHIPVIPIA VDAEREQPIA RQPDARGILS LATMMWPPNV
DGVLWFARSI YPLIKQQVEG VRFFIVGQRP VPEVRALPEQ DPTIEVTGYV PDPTPYIAAS
ACLIVPLRSG GGMRVKILEA LARGIPVVST TIGYEGIDLV PGEHLLVGDT PEAFADAVVR
LLRDPDFGAQ LAASGRRRLL ERYDWRAVCP AMDRVYERMK NQEPRTKNQE PRTKNQEPET
ENCKPIQSAE EG
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