| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1623 |
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| Symbol | |
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| ID | 5539099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2096543 |
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| End bp | 2097937 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640893760 |
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| Product | hypothetical protein |
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| Protein accession | YP_001431733 |
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| Protein GI | 156741604 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1030] Membrane-bound serine protease (ClpP class) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.475533 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCAA ACTGCTCCTC TCATCAGCGC AGCGGCATGC TGATTGCAGC GCTGGCGATT
GCGCTGCTGC TCCTCGTCTG GCCCGCTGGA AGCGCGAGAG CGCAACAGAG CGGGGGCCCG
CTGTACCTGA TTGAAGTCAG TGGTATCGTT AGCGCACCGA CGATTGATTA TCTGCGACGA
GCCGTGCAGA TTGCGGAAGC GTCGAGCGCC GACGCGCTGA TTATTTCGTA CAGCAGCACC
GGCGGCGTCC TTCGCGATGT GCGCGTCTTC GCGGCAGAAG TTGCTCAGGC GCGCGTGCCG
ATCGTGGTCT TCATTACTCC GCGGGGAACG CAGGCGGGTC CGGCCGGCGC TTTGTTCGTC
ACTGCTGCAC ACATCAGCGC CCTTTCGCCC GATACCAGTT TCGGCAGTCC TTTCCCGCTG
GCGCAGGTGG ACGATACGCT GAGCCAGCAA ACGCGCGACC TTCTTCTCGA TAATGTCAGT
TCGCAAATGC GGAAATGGAA TGAAACCCGT GGGCGGAACG CGGAATGGAT CGACCGTGCG
GTGCGTGAGG GGGTCATCCT CAACAATCAG CAGGCGATCA GCCTTGATCC TCCCGCAATT
GACCTGGTGG CCGCCGATCT GCGTGAATTG CTGACGTTGA TCGATGGGCG GATTGTCACC
CTCGATGATG GTCGTGTGGT GCGTATTTCG TCCATCGGTC GCATGCCAAC CCCAATCGAG
CCGACCCTTT TCGAGAGCCT GCGCCTGGCG CTGACCGATC CGACTGTCGC GTTTGCGCTG
CTGGTGCTCG GGTCGATGGC GATCTATCTT GAGTTGAACA CGCCGGGGAT CGGATTGTTC
GCCGGCGCCG GGTTTCTGCT GCTGCTAGGC GCGGCTGCCG GGTTTCTTGC GCTTCCGGTG
TTGTGGTGGG CAATGACATT GGTGATCCTT GGTCTGGTGC TGATCGGTGC TGAGTTTGTA
GCGCCGACTC ATGGCGGTTT GATGATCACA GGTCTGGTGA TGCTCGGTAT TGGCGGAGGA
AATCTGATCG ATGCGACACA GGCGCCCGGC GCCGGAGTCG CCTGGTGGGC GCTGTTGATC
GTGATCGGCG GGATCGCGGC CACTGCTGCG CTGGGGTTGG CGCTTGCCCT GCGCAGTCGC
AAACGTCCGG CAGCCATTGG AACCGAGGCG CTGGTGGGGC GCCTGGCGCA GGTGCGGCGG
CGACTGGATC CGCGCGGGAT GGTGTTTGTC GAAGGTGCGT TGTGGCAGGC GATCAGTGAG
ACCGATCCGG TGGAAGTTGG CGATTGGGTG CGCGTGGTCG CGGTGCATAA CTTGCAGTTG
ATTGTGCGAC CGCTCGAAAG CGAGGAGTCA ACGACCCGCG AAGCGCAACC TCCTTCTACA
GGACGTGTCG TCTAG
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| Protein sequence | MPANCSSHQR SGMLIAALAI ALLLLVWPAG SARAQQSGGP LYLIEVSGIV SAPTIDYLRR
AVQIAEASSA DALIISYSST GGVLRDVRVF AAEVAQARVP IVVFITPRGT QAGPAGALFV
TAAHISALSP DTSFGSPFPL AQVDDTLSQQ TRDLLLDNVS SQMRKWNETR GRNAEWIDRA
VREGVILNNQ QAISLDPPAI DLVAADLREL LTLIDGRIVT LDDGRVVRIS SIGRMPTPIE
PTLFESLRLA LTDPTVAFAL LVLGSMAIYL ELNTPGIGLF AGAGFLLLLG AAAGFLALPV
LWWAMTLVIL GLVLIGAEFV APTHGGLMIT GLVMLGIGGG NLIDATQAPG AGVAWWALLI
VIGGIAATAA LGLALALRSR KRPAAIGTEA LVGRLAQVRR RLDPRGMVFV EGALWQAISE
TDPVEVGDWV RVVAVHNLQL IVRPLESEES TTREAQPPST GRVV
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