Gene Rcas_1589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1589 
Symbol 
ID5539065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2043025 
End bp2043870 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content62% 
IMG OID640893727 
ProductABC-3 protein 
Protein accessionYP_001431700 
Protein GI156741571 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCC TGTGGTCCTG GATTGTCGCG CCCCTTGCGT ATGGATTCAT GCAGCGCGGG 
ATGCTGGCGG CGATGTTGGT TGGCGTCTTG TGCGCCATTG TTGGATGTTA TGTCGTGCTG
CGGTCGATGG CGTTTCTTGG CGACGCGCTG GCGCACGCCG TGCTCCCAGG CGTTGCCGTC
GCCTATCTGA TGGGCGCCAA TCTGCTCGTG GGCGCGCTCG CCGCCGCTAT CGTCGTGGCG
CTGCTGATCA GTTTTTTTTC GCGCCAGGGC GCCATCAAAG AGGATACTGC CATTGGGATC
GTCTTTGCCG CAGCGTTGGC GCTGGGTGTG GCGCTGATCA GCAGTGTGCG CACCTACGCT
GTTGATCTGA CTCATATTAT GTTCGGCAAT GTGTTGGGGG TCAGTCCGAC CGACCTGTGG
CTGATTGCGG GGATCGGCGC TGTGGTGCTG CTGACCATCC TGGCATTCTA TCGCCAGTTC
CTGGTGGTCG CCTTCGATCC TGTGCTGGCA GCAACGCAAC GCCTGCCGGT TGAGTGGCTG
CGGCTGTTGT TGCTGCTCCT GATTGCGCTC ACGATTGTCG TGTCGTTGCA AACGGTCGGC
GTGGGGTTGG TCGCAGCCAT GCTGGTGACG CCAGGCGCTG CAGCGTATCT GCTGACCCGG
CGCCTGCCCG CGATGATGGC GGTCGCTGCG CTGATCGGCG CCGTTTCGAG CATTTCCGGC
CTCTATCTGA GTTACTATAT CAACATCGCG TCCGGCGCCG CAGTGGTGCT GGTTGCCACG
ACGATCTTCA CAGTCGTTTT TCTTGCAGCG CCGGGACGCG GCATGGTGTG GCGCAGAGGG
GGATGA
 
Protein sequence
MNTLWSWIVA PLAYGFMQRG MLAAMLVGVL CAIVGCYVVL RSMAFLGDAL AHAVLPGVAV 
AYLMGANLLV GALAAAIVVA LLISFFSRQG AIKEDTAIGI VFAAALALGV ALISSVRTYA
VDLTHIMFGN VLGVSPTDLW LIAGIGAVVL LTILAFYRQF LVVAFDPVLA ATQRLPVEWL
RLLLLLLIAL TIVVSLQTVG VGLVAAMLVT PGAAAYLLTR RLPAMMAVAA LIGAVSSISG
LYLSYYINIA SGAAVVLVAT TIFTVVFLAA PGRGMVWRRG G