Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1589 |
Symbol | |
ID | 5539065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 2043025 |
End bp | 2043870 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640893727 |
Product | ABC-3 protein |
Protein accession | YP_001431700 |
Protein GI | 156741571 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACCC TGTGGTCCTG GATTGTCGCG CCCCTTGCGT ATGGATTCAT GCAGCGCGGG ATGCTGGCGG CGATGTTGGT TGGCGTCTTG TGCGCCATTG TTGGATGTTA TGTCGTGCTG CGGTCGATGG CGTTTCTTGG CGACGCGCTG GCGCACGCCG TGCTCCCAGG CGTTGCCGTC GCCTATCTGA TGGGCGCCAA TCTGCTCGTG GGCGCGCTCG CCGCCGCTAT CGTCGTGGCG CTGCTGATCA GTTTTTTTTC GCGCCAGGGC GCCATCAAAG AGGATACTGC CATTGGGATC GTCTTTGCCG CAGCGTTGGC GCTGGGTGTG GCGCTGATCA GCAGTGTGCG CACCTACGCT GTTGATCTGA CTCATATTAT GTTCGGCAAT GTGTTGGGGG TCAGTCCGAC CGACCTGTGG CTGATTGCGG GGATCGGCGC TGTGGTGCTG CTGACCATCC TGGCATTCTA TCGCCAGTTC CTGGTGGTCG CCTTCGATCC TGTGCTGGCA GCAACGCAAC GCCTGCCGGT TGAGTGGCTG CGGCTGTTGT TGCTGCTCCT GATTGCGCTC ACGATTGTCG TGTCGTTGCA AACGGTCGGC GTGGGGTTGG TCGCAGCCAT GCTGGTGACG CCAGGCGCTG CAGCGTATCT GCTGACCCGG CGCCTGCCCG CGATGATGGC GGTCGCTGCG CTGATCGGCG CCGTTTCGAG CATTTCCGGC CTCTATCTGA GTTACTATAT CAACATCGCG TCCGGCGCCG CAGTGGTGCT GGTTGCCACG ACGATCTTCA CAGTCGTTTT TCTTGCAGCG CCGGGACGCG GCATGGTGTG GCGCAGAGGG GGATGA
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Protein sequence | MNTLWSWIVA PLAYGFMQRG MLAAMLVGVL CAIVGCYVVL RSMAFLGDAL AHAVLPGVAV AYLMGANLLV GALAAAIVVA LLISFFSRQG AIKEDTAIGI VFAAALALGV ALISSVRTYA VDLTHIMFGN VLGVSPTDLW LIAGIGAVVL LTILAFYRQF LVVAFDPVLA ATQRLPVEWL RLLLLLLIAL TIVVSLQTVG VGLVAAMLVT PGAAAYLLTR RLPAMMAVAA LIGAVSSISG LYLSYYINIA SGAAVVLVAT TIFTVVFLAA PGRGMVWRRG G
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