Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1576 |
Symbol | |
ID | 5539052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 2024700 |
End bp | 2026982 |
Gene Length | 2283 bp |
Protein Length | 760 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640893714 |
Product | peptidase domain-containing protein |
Protein accession | YP_001431687 |
Protein GI | 156741558 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.599229 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCACGTC TGCATCTTCG ATCGTTGGTC GCGTGTCTGT TTATCTTCTT TGTGGCGCTC TCCGCAATGG CTACGCCAGC CCGCCTTGCT GCTGCGCCAC AGGATTTCCG CTGGGAGCCT GCGTCGCGCG CCTATACCGT CACAAATCAG ACGCCAAATA ACACGGTCCT GGTCGTCAAC GATTTTCGCC TGCGCAACGA TGATACAGTG GCGGCGACAT TCACGATTTC CTTCCCGGAG CGACCAAGCG GTTGGCAGGT GAGTACGACG ATCGCGCAGC CGATTGCCGT CAATCAGGCG ACAACGTCGG CGGTCATTCC TATTCGCATT ATCATACCGC CGAATACGCC CAATGGTGTG CGCACGGTGA CCGTGCGGGC GACGCGCACC GACGTAACGC CGAACCTGAC GGCGGAAGCG GTGATCCAGG TGACGCTGAC AGCGCCGGCG CCGGGGACGC CCCCGGTGTC TGCGTGTCCC GAGTTGTCCG ATCCGGGGAA CAATTTCGAT GGCGCTTCGC TCATCCTGGT CGATCGCGCC GAACGGCACG GTATCTGTGC GATTGGCGAT GAAGACTGGT ATAAGTTTGG CGCGGTCGCC GGAAAGTACT ATTCGATTGA TATTCCCGAA ATGGATGCCG GTCTCGATCT TTCGCTCGAA CTGTACGACT CGAACCGGCG CCTCATTGAC TCGAACGATG ATTTTCCGTT TCGCGGCGGG ACGCAAACAC TGACCGACAC GCGCCCGCTG ATCCAGTCGT TCCGTGCGCC GACCGACGGG TTTTTCTATG TGCGGGTGCG CGATACGCTG GGCATCGGCG GATCCGATCT CAGTTACACG ATTATTGTGC GCGGCGAGAG TTATGGTCCC TTCCCGCCAT TCGTTTCATC GCTCTGCAAC GACATGTATG AACAGGATGG GCTGCCGGAA CTTGCGCGGC AGATCAATCA GAACGAGACG CAACGCGGTC GCCTTCTCTG TCCGAATGGC GACGCCGATT GGGTAAAGTT CTTTGCGCTT GCCGGGTATA CGTACTATCT CTATACGAAT ACCAGACCGT ATGCGCCGCC AGACGCCAAC GGCATTCTGC CCGGCGCCGA TACGCTTCTC TTTCTGTTTG GGCGCGATGC GATCACGTTG ATCGACTCGA ACAACAACAT CGAAGGTGGC GCGACGCTCG ACTCGCTGGT GCGTTTTACC CCTGCCGCCG ATGGGATTTA TTATGCGCAG GTCAAGAATG TTGGTGATAT CGGCGGGATG TTCATCCGCT ACGATCTGAC GCTGAAAGCA TGCCCCGTTG AGCAACCGGC GTGCGCTCCT CCACCAGATA TTCTGCCAGC GCTGCCGCCG GCGGCGGTCG AGGTCGTTCC GCTGGCGCAG GATGTCGCGC CGTTGATCGA GGCGCATCTG GCGCCGCAGG TGGCGCCAGA ACTGGTTGCC GACGCTGGGG GCGAAATGAT TGTGGCGCTC GCCGGCGCTC AACCGATTGC ACGCCAGATT GATCCGGCAT TCACCGGCGC CTGGCAGCGG CTTGATCTGC CGGTCGCAGC GGGGCGCGCA CAACGCGCCT GGGTCTGGGG TCCGGCGCCG CGTCTGGCGC GCAGCGAATC GTATGTCCAG TCCGAAACCG GTCTGCGTCA GGTGCTCTAC TTCGACAAAG GACGCATGGA GATCAACAAT CCGCGCCAGG CGCGCACGAT GCCTTCCTTC GTGACGGCTG GCTTGCTGGT TGCGGAAATG GTCACGGGGC GGGTGCAGGT TGGCGATAAC GAATATGTGC CGCACCAGCC TGCGATGCTT CCTGTTGCCG GAGACCTCGA TGATGCCCGC GCGCCTGCCT ATGCGGCGTT CGCTGGTCTT CTGTCGCCGG TGGCCGAACG TGCCGGTGTG CCTGTGACCG AGATGCTGCT GGCGGATGGC AGTGTGCAAT CATCGAGCCA GCCGGTGCGA CCGGAGACGC GGATGGTGCG CTTTGTTGCC GAGACAGGAC ACAACATTCC GCGCGTCTTC TGGGATTATT TGACAGCGCC GGGTATTGTG TACGACAATG GAGTATATCG TACCAGTCGC ATGATGGACT GGGTTGCGGT TGTCGGGTAT CCGATCAGCG AAGCGTACTG GGTGCGCACG CGAGTCGGCG GCGTCGAGCG CGATGTGCTG GTGCAGTTGT TCGAGCGCCG AGTGCTGACG TATACGCCGG ATGAGCAACC TGCCTGGCGT GTGCAGATGG GGAATGTCGG TCAGCACTAC TATCTCTGGC GCTATGGCGG TCCCTTGCCG TAG
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Protein sequence | MARLHLRSLV ACLFIFFVAL SAMATPARLA AAPQDFRWEP ASRAYTVTNQ TPNNTVLVVN DFRLRNDDTV AATFTISFPE RPSGWQVSTT IAQPIAVNQA TTSAVIPIRI IIPPNTPNGV RTVTVRATRT DVTPNLTAEA VIQVTLTAPA PGTPPVSACP ELSDPGNNFD GASLILVDRA ERHGICAIGD EDWYKFGAVA GKYYSIDIPE MDAGLDLSLE LYDSNRRLID SNDDFPFRGG TQTLTDTRPL IQSFRAPTDG FFYVRVRDTL GIGGSDLSYT IIVRGESYGP FPPFVSSLCN DMYEQDGLPE LARQINQNET QRGRLLCPNG DADWVKFFAL AGYTYYLYTN TRPYAPPDAN GILPGADTLL FLFGRDAITL IDSNNNIEGG ATLDSLVRFT PAADGIYYAQ VKNVGDIGGM FIRYDLTLKA CPVEQPACAP PPDILPALPP AAVEVVPLAQ DVAPLIEAHL APQVAPELVA DAGGEMIVAL AGAQPIARQI DPAFTGAWQR LDLPVAAGRA QRAWVWGPAP RLARSESYVQ SETGLRQVLY FDKGRMEINN PRQARTMPSF VTAGLLVAEM VTGRVQVGDN EYVPHQPAML PVAGDLDDAR APAYAAFAGL LSPVAERAGV PVTEMLLADG SVQSSSQPVR PETRMVRFVA ETGHNIPRVF WDYLTAPGIV YDNGVYRTSR MMDWVAVVGY PISEAYWVRT RVGGVERDVL VQLFERRVLT YTPDEQPAWR VQMGNVGQHY YLWRYGGPLP
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