| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1558 |
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| Symbol | |
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| ID | 5539034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2000459 |
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| End bp | 2001427 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640893696 |
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| Product | pyridoxal-5'-phosphate-dependent protein beta subunit |
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| Protein accession | YP_001431669 |
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| Protein GI | 156741540 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.813791 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCATC CGCTTCCATT CCGGGCGATT GATGCCGCGC GATCGCGCAT TGCCCCATTC
GTGCGGCATA CGCCGCTTAT GCCGCTGCCC GCATTGCGTA GCGACTTTCA TCCCAACCTG
CGCCTCAAAC TGGAAAATCT GCAAGTCGCA GGTTCGTTCA AGGTGCGTGG CGTCTTCAAT
CACCTGTTGC AACTCGACGT GGCGCAGCGC GAGCGTGGTG TGATCGCCGC ATCCGGCGGC
AACCACGGTC TTGCGCTGGC ATACGCCGCC TGGCGGTTGG GCATCCCCGC CGTCGTCTAT
CTGCCCGCGC GCGCCTCGGC TGACCGTGAG CGACGCATTG CGGCATGGGG GGCGCGTATC
TTCCGCCATG GCGACGCCTG GGACGATGCG CACCGCCGCG CTCTGGAACA CGCTGCCGCC
GAAGGACTGT ACTATGTGCA TCCGTTTGAC GACATTCGCA CCCTTGAGGG GCAGGGCACG
CTTGGTCTCG AAGTGCTCGT CGATGCGCCT TGCATCGATC TGGCGCTGAT CGCCGTCGGC
GGCGGCGGGT TGATCGGCGG CGTGGCAGCG GCGCTCAAAC AGGCGCGTCC TGGCATTTGC
ATCGTCGGCG TTGAACCGAT CGGCGCACCG ACGATGACCG TCAGCCTCAA CGCCGGTCGA
TTGGTGGAAT TGCCCGCCGT CCACAGCATC GCCGACACCC TCTCGCCGCG CGCGCTCAGT
GAACGCACAC TGGACCTGGC GCTGCGGTAC GTCGATGATG TGGCGCTGGT CACCGACGAG
CAAATGGTGG AGGCTATGCG CTGGCTCTGG ACTGAGTGCA ATCAACTGGT CGAACCGGCC
GGCGCCGCCG TGATCGCTGC GCTCCAGAGC GGCACTGTGG ACGCCACGCG CTACGCGGCG
CCGGTTGCCG TCATCTGCGG CGGCAATGTC GATGCCGGAT GTGTGTTTGA GCAGTACACT
GCGGGGTAG
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| Protein sequence | MEHPLPFRAI DAARSRIAPF VRHTPLMPLP ALRSDFHPNL RLKLENLQVA GSFKVRGVFN
HLLQLDVAQR ERGVIAASGG NHGLALAYAA WRLGIPAVVY LPARASADRE RRIAAWGARI
FRHGDAWDDA HRRALEHAAA EGLYYVHPFD DIRTLEGQGT LGLEVLVDAP CIDLALIAVG
GGGLIGGVAA ALKQARPGIC IVGVEPIGAP TMTVSLNAGR LVELPAVHSI ADTLSPRALS
ERTLDLALRY VDDVALVTDE QMVEAMRWLW TECNQLVEPA GAAVIAALQS GTVDATRYAA
PVAVICGGNV DAGCVFEQYT AG
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