Gene Rcas_1554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1554 
Symbol 
ID5539030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1995519 
End bp1995929 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content57% 
IMG OID640893692 
ProductS23 ribosomal protein 
Protein accessionYP_001431665 
Protein GI156741536 
COG category 
COG ID 
TIGRFAM ID[TIGR02436] conserved hypothetical protein TIGR02436 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTAG AAAGTTCAGT AGCGATGGTA AAGGGCTATA CGCATCGCAA TCTCATTCTG 
TGGAACCGGG CGCAGCAACT GGCGCTCGAT GTGATAACGA TCGCGCGGCG GATGCCGAAC
ACGTGGAGCA ATGCGGTCAT TGCGCGACAG ATCATCGCTT CCGCCACGTC AATTGGCGCG
AATATCGCCG AAGGACATGG GCGCTACACT CCTGGCGCGC ACCGCAATCA CCTGGCAATC
GCCAAAGGAT CAACCGCCGA AACTGATCGC TGGCTCGATC TGCTCCGCCG TAGCGGGTAT
CTTTCCGAAG AGGATGAAGC CAGACTTCAC AGCGAATGCC AGGAAATCGC GGCAATGCTG
ACGAGCAAAA CTGGAGCATG CCATCCCATC ACACACGTCA ACGACTCATG A
 
Protein sequence
MRVESSVAMV KGYTHRNLIL WNRAQQLALD VITIARRMPN TWSNAVIARQ IIASATSIGA 
NIAEGHGRYT PGAHRNHLAI AKGSTAETDR WLDLLRRSGY LSEEDEARLH SECQEIAAML
TSKTGACHPI THVNDS