| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1549 |
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| Symbol | |
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| ID | 5539025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1988333 |
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| End bp | 1989751 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640893687 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_001431660 |
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| Protein GI | 156741531 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.269438 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.14031 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCGCA CACTGTTCGA CAAAATCTGG GACACCCACA TCGTGCGCCC GCAAACGGCG
GAAACGCCTG CGGTGCTTTA CATCGATCTC CATCTCATTC ACGAAGTAAC CTCGCCCCAG
GCATTCACCG AACTACGCCG GCGCGGGTTG AAAGTCCGCC GTCCGGATCG CACGCTGGCG
ACGATGGACC ACTCGACCCC AACCACGCCG CGCGGACCGG ATGGGATCAT TCCGGTGGTC
GATGCGCAGG CGGCGGCGCA ACTTCGCCAA CTCGAACAGA ACTGCGCCGA TTTCGGCATC
CCGCTCTTCG CGCTTGGCAG CGAGCGCCAG GGGATCGTCC ACGTCATCGG TCCTGAGCAG
GGGTTGACCC AACCCGGCAT GACCATCGTC TGTGGTGATA GCCACACCAG CACCCACGGC
GCTTTTGGTG CGCTGGCGTT CGGCATCGGC ACCTCGGAAG TCGCGCACGT CCTGGCGACG
CAATGCCTGA TCCAGAACCG CCCCAAAACG ATGGAGGTGC GCGTCGATGG TCGCCTGAAG
CCGGGAGTGA CTGCCAAGGA CATTATTCTG GCGATCATTG CGCGATACGG CGTCGGCGCC
GGCGTCGGGC ATGTGTTCGA GTACACCGGC GAGGCAATCC GCGCGCTCTC GATGGAAGAG
CGCATGACGA TCTGCAACAT GTCAATCGAA GGCGGCGCGC GCGCCGGGAT GATTGCGCCC
GATGACACGA CGTTCCAGTA CATTGCCGGG CGCCCCTTCG CGCCGAAAGG CGCAGCATGG
GACGAGGCCG TGGCATACTG GCGCACTCTG CCGACCGACG ATGGCGCGGT GTACGACCGG
ACGATCACCC TGGATGCATC GCAACTGACG CCGATGATCA CCTACGGCAC CAACCCCGGC
ATGGGGATAC CGATTGACGG TCGCATCCCG ACACCGGAGG AACTGCCCGA TCAGGCAGCG
CGCCAGGCGC TCGACAAGGC GCTGCGCTAT ATGGACCTGC GACCCGGTCA ACCGCTACTC
GGTCAAAAGG TCGATGTCGT CTTCCTGGGT AGTTGCACCA ACTCGCGCAT TTCGGACCTC
CGCATGGCGG CGAGTGTGCT GAAAGGGCGC AAGATCGCCG AAGGCGTGCG CATGATGGTC
GTGCCCGGCT CGCAGCAGGT GAAGAAGCAG GCGGAAGCCG AAGGACTGGA CCGTATTTTC
CGCGAGGCAG GCGCCGAATG GCGCGAAGCC GGCTGCTCTG CCTGCCTCGG CATGAACGAC
GACAAGGTTC CGCCGGGCAA ATATGCTGTC TCGACTAGCA ACCGCAACTT CGAGGGGCGC
CAGGGACCCG GCGCGCGCAC GCTTCTTGCC AGCCCGCTCA CCGCCGTTGC ATCCGCCATC
GAAGGCGTTG TCGCTGATCC GCGGAAATAT GTGGGATAG
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| Protein sequence | MPRTLFDKIW DTHIVRPQTA ETPAVLYIDL HLIHEVTSPQ AFTELRRRGL KVRRPDRTLA
TMDHSTPTTP RGPDGIIPVV DAQAAAQLRQ LEQNCADFGI PLFALGSERQ GIVHVIGPEQ
GLTQPGMTIV CGDSHTSTHG AFGALAFGIG TSEVAHVLAT QCLIQNRPKT MEVRVDGRLK
PGVTAKDIIL AIIARYGVGA GVGHVFEYTG EAIRALSMEE RMTICNMSIE GGARAGMIAP
DDTTFQYIAG RPFAPKGAAW DEAVAYWRTL PTDDGAVYDR TITLDASQLT PMITYGTNPG
MGIPIDGRIP TPEELPDQAA RQALDKALRY MDLRPGQPLL GQKVDVVFLG SCTNSRISDL
RMAASVLKGR KIAEGVRMMV VPGSQQVKKQ AEAEGLDRIF REAGAEWREA GCSACLGMND
DKVPPGKYAV STSNRNFEGR QGPGARTLLA SPLTAVASAI EGVVADPRKY VG
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