| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1532 |
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| Symbol | sucA |
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| ID | 5539008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1951569 |
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| End bp | 1954430 |
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| Gene Length | 2862 bp |
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| Protein Length | 953 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640893670 |
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| Product | 2-oxoglutarate dehydrogenase E1 component |
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| Protein accession | YP_001431643 |
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| Protein GI | 156741514 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00682538 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0204532 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCCG ATACACTGTT TCACGGACCA AACGCCGGAT ACGTGATCGA ACTCTACGAA
CGCTACCGCG CCAACCCTGA GTCGGTCGAC CCGGCGACGC GCACCTTCTT CGCGCACTGG
TCGCCGGAGG AGATCGCAAC GGTTGCCGTT GCCACACCTC CACCTGCGGC GCTTCCGATG
ATCGATCTCC AGACTGCGCC GGACATTGAT CTCTCCAAAG CGCATATCGG TCCAACATCG
CCGATCGATG TCACCCACAC CGTCGCTGCC GCCCGTCTCA TTCGCTACAT TCGCGAGCTG
GGGCATCTGG CGGCGCGGAT CGACCCGCTC GGCAGCGATC CGCCCGGCGA TCCGGGTCTT
GATGCCGCCA TCCACGACGT CACCGATGCC GACCTGGCGC TCCTGCCCGC CTATATCGTG
CGCGGACCCC TGGCTGCCGA GTCGCGCAAT GCACTCGACG GCGTGCAAAA ACTGCGCGAG
GTCTACTGCG GCACAATCGG CTACGAAACC GACCATGTGC AGGTCTTTGA GGAACGCGCC
TGGATCCGCG ACGCAGTCGA GAGCCGTCGA TTCTTCTACG GCTTCGACGA TGTTCGCAAA
CGTGAACTTC TCGAACGCCT GACCGAGGTT GAGACCTTCG AGCGTTATCT GCACCAGACC
TTTGTCGGGC AGAAGCGGTT CTCAATCGAA GGATGCGACA TGCTGATCCC AATGATCGAC
TCGATCATTC GCAATGCTGC GGTCGGCGGC GTGCGCGAAG TCGTCATCGG AATGGCGCAT
CGCGGGCGCC TGAATGTGCT GGCGCATATT CTGGGCAAGC CGTATAGTGC CATTCTGAGC
GAATTTCTGA CTGCCGGGCG CGACGCGGCG CTCTCACCGG CCGGACGCGG CGCTGCCGGG
TGGGTTGGGG ACGTCAAGTA CCACCTCGGC GCACACCGCG CTTTCCGCGA AGCCGGGATC
GAGCAGATGC CGATCACGCT GGCGCCCAAC CCCAGTCACC TGGAGTTTGT CAATCCGGTT
GTCGCCGGGC GCGCGCGCGC CGTGCAGGAA CAGTGCGATC AAGCGGGTGC GCCGGTGCAG
GATAAACGCG CTTCGCTCCC AATCCTCATC CACGGCGATG CGGCTTTTCC CGGTCAGGGG
ATCGTCGCCG AGACGCTGAA CCTTGCCAAC CTTGCCGGGT ATAGCACCGG CGGAACTATC
CACATTATCG TCAACAATCA GATCGGGTTC ACCACCTCGC CGCGCGAAGG CCGTTCGACG
CTCTACGCCA GCGATCTGGC GAAAGGGTTC GAGATTCCGA TTGTCCACGT CAATGCCGAT
GATGTCGAGG GGTGCATCGC GGTGGCGCGC ATGGCTTACG CCTACCGCGA GCGCTTCGGC
AAGGACTTTC TGATCGATCT GGTCGGCTAC CGGCGTTGGG GGCATAACGA AGGCGATGAA
CCTGCATTTA CGCAACCAAC GATGTACACG ATTATCGCGC GACACCCGAC GGTTCGTGAG
CAGTGGGCGT CGAAACTGAT CGCGGAAGGC GTGATATCCG CCGAAGAGTC GAACCAGATG
ATGACGACCG TCTGGGATCG GTTACAGCAG GCGCGCAGCG AAGCGGAAGC GCACCCGCAC
TTCGAGGAGC CGCCGCCATC GCCGCCTCCG GGCATCGCCC GACGCACGCA TACCGCCGTT
GCCGCCGAGC GACTGGTTGC GCTCAACGAG GCGCTCCTCC AGTGGCCCCC TGGCTTTCGG
GCGCACCCGC GACTGGAACG CATGCTGGAA CGGCGGCGCA CGGCGCTGCA TATGCCAGGC
GCCATCGAGT GGGCGCACGC CGAGATTCTG GCATTCGCCT CGCTCCTGGA AGAGGGCATC
CCCATCCGCC TGACCGGACA GGACGTTGAG CGCGGCACGT TTAGCCAGCG CCATCTGGTG
CTGCACGATG CGCAGACTGA TGAACGCTGG TGTCCCCTCC AGGCGCTGCC GCAGGCGCGT
GCATCGTTTG CGGTCTACAA TAGTCCGCTC TCCGAAGCGG CTGCACTCGG TTTCGAGTTC
GGCTATTCGG CGCACAACCC GCAGGCGCTC GTCATCTGGG AGGCGCAATT CGGCGACTTC
GCCAACGGCG CGCAGGTCAT CATCGATCAG TTTATCGTGT CGGCGCGCAA GAAATGGGGA
CAAACGCCGG CGCTTGTCAT GCTCCTCCCT CACGGTTACG AAGGGCAGGG TCCCGAACAT
TCGAGCGCGC GCCTCGAACG CTTTTTGCAA CTTGCCGCCG AGGACAACAT TCGGGTGGCG
AACTGTACCA CGGCAGCGCA GTATTTCCAT CTGCTGCGCC GCCAGGCGCT CCTGTTGAAC
GCCGATCCGC GCCCATTGAT TGTGATGACG CCCAAAAGCC TGCTGCGCCA CCCACGCGCT
GCGTCATCGC TGCACGATCT CAGCGAAGGG CGCTTCCAGC GGGTGATCGA CGATCCACAG
GCACGTGAGC GTCCGGCGGA TGTTGCGCGC CTGGTGCTCT GTTCCGGGAA AATCTATGTC
GATCTGCTGA GCGCCAGCGA CACGCCGTTG ACGAATGGCG TCGCAGTGGT GCGGCTGGAG
GAATTGTATT CCTTCCCCGT CGATGAACTG CGCGACGTGC TGGCGGGCTA CCCCAATCTT
CAGGAGGTCA TCTGGTTGCA GGAAGAGCCG GAGAACATGG GCGCCTGGCG CTATGTTGCG
CCGCGTCTGC GCGAACTGAT CGGACCCGAC CTGACGCTCA GTTATGTCGG GCGACCGGCA
TCGGCGAGTC CATCGGAAGG ATCGCTGGCG TTGCATCTGA TCGAGCAGCA ACGCCTGATC
GCCGAGGCGC TGCGCGCGCC AGCAGTTGAA CAGTATCACT GA
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| Protein sequence | MPADTLFHGP NAGYVIELYE RYRANPESVD PATRTFFAHW SPEEIATVAV ATPPPAALPM
IDLQTAPDID LSKAHIGPTS PIDVTHTVAA ARLIRYIREL GHLAARIDPL GSDPPGDPGL
DAAIHDVTDA DLALLPAYIV RGPLAAESRN ALDGVQKLRE VYCGTIGYET DHVQVFEERA
WIRDAVESRR FFYGFDDVRK RELLERLTEV ETFERYLHQT FVGQKRFSIE GCDMLIPMID
SIIRNAAVGG VREVVIGMAH RGRLNVLAHI LGKPYSAILS EFLTAGRDAA LSPAGRGAAG
WVGDVKYHLG AHRAFREAGI EQMPITLAPN PSHLEFVNPV VAGRARAVQE QCDQAGAPVQ
DKRASLPILI HGDAAFPGQG IVAETLNLAN LAGYSTGGTI HIIVNNQIGF TTSPREGRST
LYASDLAKGF EIPIVHVNAD DVEGCIAVAR MAYAYRERFG KDFLIDLVGY RRWGHNEGDE
PAFTQPTMYT IIARHPTVRE QWASKLIAEG VISAEESNQM MTTVWDRLQQ ARSEAEAHPH
FEEPPPSPPP GIARRTHTAV AAERLVALNE ALLQWPPGFR AHPRLERMLE RRRTALHMPG
AIEWAHAEIL AFASLLEEGI PIRLTGQDVE RGTFSQRHLV LHDAQTDERW CPLQALPQAR
ASFAVYNSPL SEAAALGFEF GYSAHNPQAL VIWEAQFGDF ANGAQVIIDQ FIVSARKKWG
QTPALVMLLP HGYEGQGPEH SSARLERFLQ LAAEDNIRVA NCTTAAQYFH LLRRQALLLN
ADPRPLIVMT PKSLLRHPRA ASSLHDLSEG RFQRVIDDPQ ARERPADVAR LVLCSGKIYV
DLLSASDTPL TNGVAVVRLE ELYSFPVDEL RDVLAGYPNL QEVIWLQEEP ENMGAWRYVA
PRLRELIGPD LTLSYVGRPA SASPSEGSLA LHLIEQQRLI AEALRAPAVE QYH
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