| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1511 |
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| Symbol | |
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| ID | 5538987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1929082 |
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| End bp | 1930482 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640893649 |
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| Product | amidophosphoribosyltransferase |
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| Protein accession | YP_001431622 |
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| Protein GI | 156741493 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
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| TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.409813 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0292739 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATGGG GCGACAGTCC AGGGCATGAG TGCGGCATCT TTGGCATCTA TGCGCCGCAC
GAGGACGTGG CGCGCCTGAC GTTCTTCGGT CTTTATGCGC TGCAACATCG CGGGCAGGAG
AGTGCGGGCA TTGCAGTATC CGACGGGCGA CGCATCCATC TCCACAAGGA AATGGGCCTG
GTCGCTCAGG TGTTCAATGA AGAAAAATTG CGCCCGCTCA AAGGATATAT CGCAATCGGG
CACACCCGCT ACTCCACTAC CGGATCATCG AAATTGCAAA ATGCGCAGCC GTTTGTGGTC
GAGAGTGTCC TTGGACCTCT GGCGGTCGGT CATAACGGCA ACCTGACGAA TGCGCCGCAA
TTGCGGCGCG AATTGTTGAC GCGCGGCGTG GGGCTGATAT CGTCGAGTGA TAGCGAAGTG
ATCACGCAGA TGCTCGCCGG CGGCGAGGGA CGAACCTGGG AAGAAAAGTT GCGCGTCTTC
ATGATCCGTG CCGAAGGAGC GTACTGCCTG ACGGTGATGA CGCGCGATAC ACTCTACGCA
GTGCGCGATC CCTGGGGGTT GCACCCGCTC TGCTACGGGC ATCTTGGCAA TGGCGGGTGG
GTGGTGGCGT CGGAGAGTTG TGCGCTGGCA ACCATTGGCG CAACACTGGA ACGCGAACTG
GCGCCGGGTG AGATCATGGC GTTCGATGAG CGCGGTCCGC GCACGATTGC GCACTCTCCT
GCGCCGCAAC GTGCCATGTG CCTTTTTGAA TACATCTATT TTGCCCGCCC CGACAGCATT
GTCGATGGAC AAACGCTTCA CGCTGCGCGG GTTGCTGCCG GGCGTGAACT GGCGCGCGAA
GCGCCGGCCG ACGCCGATAT TGTCATTCCG GTGCCCGACA GCGCTGTTCC CGCCGCCATT
GGCTATGCGC AGGAGTCGGG CATTCCTTAT CAGGAAGGGT TGATCAAGAA CCGGTATATT
GGGCGCACTT TCATTCAGCC CGACGATCGC CTGCGCAAAC TTGGCGTACA GTTGAAGTTC
AACCCGTTGA GTGATAGCCT GGCGGGTAAA CGTGTGGTGC TGGTGGACGA TAGCATCGTG
CGCGGGAATA CGTCAGGTCC GATTGTGCGG TTGTTGCGCG ATGCCGGGGC TGTGGAGGTT
CATATGCGCG TCTCGTCGCC ACCGATCAAG CATCCTTGCT TCCTCGGCGT CGATATGGCA
ACCTACCCGG AGCTGATCGC GCATCGCTTG ACGCTGCCGG AGATCCGCGA TCACCTGGGG
GTCGATAGCC TGGCGTATCT CAGCCTGGAA GGTCTCATTC GCGCAACTGG CAATTCGGGC
AAGGGGTTCT GCAATGGCTG CTTCACCGGG AATTATCCGG TGGACGTGCA TCTGCTCGAA
AAGGAAGCGT TTGAGGGGTG A
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| Protein sequence | MAWGDSPGHE CGIFGIYAPH EDVARLTFFG LYALQHRGQE SAGIAVSDGR RIHLHKEMGL
VAQVFNEEKL RPLKGYIAIG HTRYSTTGSS KLQNAQPFVV ESVLGPLAVG HNGNLTNAPQ
LRRELLTRGV GLISSSDSEV ITQMLAGGEG RTWEEKLRVF MIRAEGAYCL TVMTRDTLYA
VRDPWGLHPL CYGHLGNGGW VVASESCALA TIGATLEREL APGEIMAFDE RGPRTIAHSP
APQRAMCLFE YIYFARPDSI VDGQTLHAAR VAAGRELARE APADADIVIP VPDSAVPAAI
GYAQESGIPY QEGLIKNRYI GRTFIQPDDR LRKLGVQLKF NPLSDSLAGK RVVLVDDSIV
RGNTSGPIVR LLRDAGAVEV HMRVSSPPIK HPCFLGVDMA TYPELIAHRL TLPEIRDHLG
VDSLAYLSLE GLIRATGNSG KGFCNGCFTG NYPVDVHLLE KEAFEG
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