Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1504 |
Symbol | |
ID | 5538979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 1920599 |
End bp | 1921294 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640893642 |
Product | two component transcriptional regulator |
Protein accession | YP_001431616 |
Protein GI | 156741487 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.263867 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.57819 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCAAC GCATTCTGGT GGTTGATGAT GATCGTCAGA TCACGCGGCT GGTCAGCGCC TACCTGGAGC ACGCTGGATT TCAGACACTG ACTGCACACG ATGGCGCAAC TGCCCTCCGC CTGGCACGCA GTGAGCGCCC CGATCTGATG GTGCTCGATC TGATGCTGCC CGATATCGAT GGCGCCGATC TGACGCGCGC CATACGCGCC GACCCGCATA TCGCCGCAAT GCCGATTATT ATGCTGACGG CACGGGTTGA CGACACCGAC AGGATTGTGG GGCTCGAACT CGGCGCCGAC GATTACATCA CCAAGCCATT CAATCCACGC GAGGTCGTTG CGCGGGTGCG CGCTGTTCTG CGCCGCACCA GCGGTGGAAC GCCGCAGCCA GCGGTCCTCC TCGAAGCAGG TCGGGTGCGG CTCGATCCTG ATCGACACGA AGTGACCGTG GCAGGTCAAC CCCTCAACCT GACGCCGACC GAGTTTCATC TGCTGCGCAT CTTTCTGAGC CTGCCAGGGC ATGCGTTTAC GCGCCGCGAA TTGATCGAGG AAGGGGTTGG CTATGAGTAT GAAGGGATGG AACGCACGAT TGACAGCCAT ATCAAGAATC TGCGCCGCAA ACTTGAATCG GTCGATGCCG GCATCAGGAT CGAAACCGTG TATGGCGTGG GTTATCGCCT GAAGGTTGTC GCATGA
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Protein sequence | MPQRILVVDD DRQITRLVSA YLEHAGFQTL TAHDGATALR LARSERPDLM VLDLMLPDID GADLTRAIRA DPHIAAMPII MLTARVDDTD RIVGLELGAD DYITKPFNPR EVVARVRAVL RRTSGGTPQP AVLLEAGRVR LDPDRHEVTV AGQPLNLTPT EFHLLRIFLS LPGHAFTRRE LIEEGVGYEY EGMERTIDSH IKNLRRKLES VDAGIRIETV YGVGYRLKVV A
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