Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1494 |
Symbol | |
ID | 5538969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 1910060 |
End bp | 1911334 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640893632 |
Product | seryl-tRNA synthetase |
Protein accession | YP_001431606 |
Protein GI | 156741477 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0172] Seryl-tRNA synthetase |
TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.457179 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGACA TTCGCCTGAT ACGTGAGCAA CCCGACATGG TCAAAGCGGC GCTTGGGCGG GCAGGCGTCG ATCCAGCACA GGTTGACGCT GTGCTGGCAT ACGACGAACA ACGTCGCGCG CTGCTGCGCG AAGTGGAGAA ACTGAAAGCC TTGCGCAATG CGGTCTCAAA AGAGATCGGC AAGATGAGCG ACGCGGGCGA ACGCGACACG AAAATCGCCG AAATGCGCGC CGTCGGCGAC CGCATCGCCG CGCTGGACCG CGAACTCGCT GCGGTGGAAG AGCGGCAGTA CGCTGCGCTA ATGGAACTGC GCAACCTGCC GCATCCCGCA GTTCCCGACG GACCGGACGA GACCTACAAC GTGGTGATTG CGCAGGAAGG TGAACCGCGC GCCTTCGATT TTGCGCCAAA GCCACACTGG GAACTCGGCG AAGCGCTCGA CATCATCGAT TTCGAGCGGG GCGTCAAACT CTCCGGCTCA CGCTTCTACG TCCTCAAAGG GCTGGGAGCG CGCCTGCAAC GCGCCCTGAT CCAATGGATG CTCGATCTTC ACATCCAACA GGGATACCAC GAGGTCTATA CACCGTTCGT GGTAAAAGAG CAATGCATGT GGGGCGCGCG CCAGTTGCCC AAGTTCCGTG ACAACCTCTA CCGCGACGTG GAGGACGACC TGTGGCTGGT GCCGACCGCC GAGGTGCCGG TCACCAATCT CCACCGCGAC GAGATTCTCG AGGCGGATCA GTTGCCGCTC CGCTATTGCG CCTACACCCC CTGCTTCCGC CGCGAAAAGA TGAGCGCCGG GCGCGATGTG CGCGGCATCA AGCGCGGGCA CCAATTCGAC AAAGTCGAGA TGTACATGTT TGTCCACCCC GACACAAGCT ACGACGAACT CGAGAAACTA CGCGCCGACG CCGAAGCAAC CTGTCGTCTG CTGGGATTGA CCTTCCGCAC CAAAGAACTC TGCACCGGCG ACCTCGGATT TGCCGCCACG CGCACCTACG ATATCGAGGT GTGGGCGCCG GGGCAGGGCG AATGGCTCGA AGTCAGCTCC TGCTCGAATG TCGAAGCCTT TCAGGCGCGG GCAGCGAACA TTCGCTACCG TTCAGCGCCG GGGGCGCGTC CAGAGTATGT CCATACCCTG AACGGCTCAG GGTTGGGGCT GCCGCGCACG CTGATAGCCA TTATGGAGAA CTACCAGCAG GCTGATGGCA GCATCATCAT TCCTGACGTT CTGCGTCCGT ATATGGGGGG GGCTGAGGTT ATTCGACGGT CATAA
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Protein sequence | MLDIRLIREQ PDMVKAALGR AGVDPAQVDA VLAYDEQRRA LLREVEKLKA LRNAVSKEIG KMSDAGERDT KIAEMRAVGD RIAALDRELA AVEERQYAAL MELRNLPHPA VPDGPDETYN VVIAQEGEPR AFDFAPKPHW ELGEALDIID FERGVKLSGS RFYVLKGLGA RLQRALIQWM LDLHIQQGYH EVYTPFVVKE QCMWGARQLP KFRDNLYRDV EDDLWLVPTA EVPVTNLHRD EILEADQLPL RYCAYTPCFR REKMSAGRDV RGIKRGHQFD KVEMYMFVHP DTSYDELEKL RADAEATCRL LGLTFRTKEL CTGDLGFAAT RTYDIEVWAP GQGEWLEVSS CSNVEAFQAR AANIRYRSAP GARPEYVHTL NGSGLGLPRT LIAIMENYQQ ADGSIIIPDV LRPYMGGAEV IRRS
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