| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1491 |
|---|
| Symbol | |
|---|
| ID | 5538966 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 1905704 |
|---|
| End bp | 1906678 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640893629 |
|---|
| Product | malonyl CoA-acyl carrier protein transacylase |
|---|
| Protein accession | YP_001431603 |
|---|
| Protein GI | 156741474 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0331] (acyl-carrier-protein) S-malonyltransferase |
|---|
| TIGRFAM ID | [TIGR00128] malonyl CoA-acyl carrier protein transacylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.612375 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGC GCATTGCGCT GGTGTTTCCG GGGCAAGGTT CGCAATACGT CGGCATGGGC
AAGGAGTTGT GCGAGGCGTC GCCAGCTGCG CGTCGGGTCT TTGAGAAGGC GGATCAGGTG
CTTGGCTTCG AACTCTCCAG GCTGTGCTTC GAAGGTCCGC AGGAGGAACT CGACGATACA
ATCAATGCGC AGCCCGCGAT TCTGACGGTG AGTGTTGCAT GCCTCGAAGC GCTCAAGGAG
CGTTTTGGTC CCTTCGGGTA TCTGGGCGCG CCCTCCCTTG TCGCTGGTCA TAGCCTGGGT
GAGTTTACCG CGCTGGTCGC GGCTGGGGTG CTCGATTTCG AGGATGCGCT CAAACTGGTG
CGCGAACGCG GGCGATTGAT GAAGGAGAGC GGTGAGCAGC GCCCCGGCGG AATGGCAGCG
GTCGTTGGTC TCGATGACAA GACCTTGGAA GAAGTCGTGG AAGAGGCGCA GGCGGAAGGG
GTTGTCTCGG TCGCGAATGC AAACTCTCCG GGGCAGACGG TGATCTCCGG CGAACATCGC
GCATTGCAGC GCGCGATGGA ACTGGCAAAA GCACGCGGCG CAAAACTGGT GCAGCGTTTG
CAGGTGAGCA TTGCAGCGCA TTCGCCGCTG ATGCAGAGCG CCTCAACGCG GTTCGATGAA
TTGTTGGATC GGTTCCAATT GCGCCCGCCT CAGGTGCCGT TGATTGCCAA CATCAGCGGG
CGCGCGCTGA CGACGGTCGA AGAACTGCGG AACGAACTCT CGCAGCAGTT GACGCGCCCG
GTGCAGTGGA CGCGCTCGGT GCAGGAGATG GTATCCCACG GTGTTGATAC CATTGTTGAG
GTCGGTCCGC GCCAGGTGTT GTCGGGATTG ATCAAGCGCA TCACGCCGCA TGCCAAACCG
GTGCCGCTGA CCGATGCCGA GGTGGCGCGC CTGGTCGCGC AGGCGGAAAG TGAAAAAGAA
GGCTCTGGCA TCTGA
|
|---|
| Protein sequence | MKKRIALVFP GQGSQYVGMG KELCEASPAA RRVFEKADQV LGFELSRLCF EGPQEELDDT
INAQPAILTV SVACLEALKE RFGPFGYLGA PSLVAGHSLG EFTALVAAGV LDFEDALKLV
RERGRLMKES GEQRPGGMAA VVGLDDKTLE EVVEEAQAEG VVSVANANSP GQTVISGEHR
ALQRAMELAK ARGAKLVQRL QVSIAAHSPL MQSASTRFDE LLDRFQLRPP QVPLIANISG
RALTTVEELR NELSQQLTRP VQWTRSVQEM VSHGVDTIVE VGPRQVLSGL IKRITPHAKP
VPLTDAEVAR LVAQAESEKE GSGI
|
|---|
| |