| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1481 |
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| Symbol | |
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| ID | 5538956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1893908 |
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| End bp | 1895203 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640893619 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_001431593 |
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| Protein GI | 156741464 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.826283 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCATA CGATGATTGC GCCGCGACGG TTACGCGGCA TTATCGATCT CCCCGGCGAT
AAATCGATTT CGCACCGCGC TGTGCTGTTG AATGCGATAG CAACCGGTGC GGCTGAAGTT
GCGAACTTTC TCACCGGCGC CGACTGTCTG TCGACGATTG CATGCGTTCA GGCGCTTGGC
GTGCGCGTCG AGCGCCATGA GGACACGGTG CGGGTGTTTG GCGCGGGGTT GCGCAGCCTG
CGCGAGCCGG TCGATGTGCT GGACTGCGGC AACTCCGGCA CAACGCTGCG CCTTTTGACG
GGTATGCTTG CCGGTCAGGA GGGGATATTT GCCGTGTTGA CCGGCGATGC CTCGCTCCGT
TCGCGACCGC AGCAACGGAT TGTGGCGCCG CTGCGCGCGC TTGGCGCTAC TCTCGACGGG
CGGGATCGGG GGAATCGCGC GCCGCTGGTG GTGCGCGGCG CGTATCTTCA CGGCGGCGCA
TACGATCTGC CGATTGCCTC GGCGCAGGTC AAGAGCGCCC TGCTGCTGGC GGCGTTGTTC
GGCGACGGAA CGCTCACACT GACCGGACGC ACCGATGGAC GCGATCACAC CGAACGCATG
CTGGCAGCCA TGGGGGCAAC AATCACGGTT GATGGACAGA CCATCCGGTT GACGCCGCCG
GATCGTTCCG AAGCGCTGCA CCCGTTGTCG TTGCGAGTTC CGGGCGATCC GTCATCGGCG
ACGTTCTGGT GGGTGGCAGC CGCGCTCCAT CCCGACGCCG AACTGACAAC GACGGGCGTT
TGCCTGAACC CGACGCGCAC CGGCGCACTC GACGCGCTCC GCGCCATGGG AGCGCAGATC
GACGTGGCGA ATCAGCGTGT CGAAGGCGGC GAACCGGTGG GTGATGTGAC TGTGCGTTCT
TCGTCTTTGC ACGGCATTGT GATTGAAGGA GCGCTTATTC CGCGCCTGAT CGACGAACTG
CCGGTTCTGG CGCTCGCAGC CGCCTGCGCT GAAGGCGAAA CGATCATCCG CGACGCACAG
GAATTGCGCG TCAAAGAAAC CGATCGCATC GCTACGGTTG TGGCGGGATT GACGGCGCTC
GGCGCAGTCG TGGAGCCGAC AGAAGACGGC ATGATCATTG CAGGCGGCGG CAACCTGCGC
GGCGCTACGC TCGAAAGCCA CGGCGACCAT CGCCTGGCGA TGACGTGGGC GATTGCCGGT
CTTGTAGGAG CAGGTGAAAC AACGCTGCAT GGCGCGGAAG CGGTAGATGT GTCATACCCG
GAGTTTTGGA ATGTGCTGAG GCGGATACGT GAGTGA
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| Protein sequence | MIHTMIAPRR LRGIIDLPGD KSISHRAVLL NAIATGAAEV ANFLTGADCL STIACVQALG
VRVERHEDTV RVFGAGLRSL REPVDVLDCG NSGTTLRLLT GMLAGQEGIF AVLTGDASLR
SRPQQRIVAP LRALGATLDG RDRGNRAPLV VRGAYLHGGA YDLPIASAQV KSALLLAALF
GDGTLTLTGR TDGRDHTERM LAAMGATITV DGQTIRLTPP DRSEALHPLS LRVPGDPSSA
TFWWVAAALH PDAELTTTGV CLNPTRTGAL DALRAMGAQI DVANQRVEGG EPVGDVTVRS
SSLHGIVIEG ALIPRLIDEL PVLALAAACA EGETIIRDAQ ELRVKETDRI ATVVAGLTAL
GAVVEPTEDG MIIAGGGNLR GATLESHGDH RLAMTWAIAG LVGAGETTLH GAEAVDVSYP
EFWNVLRRIR E
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