| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1422 |
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| Symbol | |
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| ID | 5538895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1817226 |
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| End bp | 1818737 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640893559 |
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| Product | RNA-binding S1 domain-containing protein |
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| Protein accession | YP_001431535 |
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| Protein GI | 156741406 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.324209 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATC AGGAGCGTCC CGTCGAAGAG CGGAATGAAC TGCTGGGCGA TTCGGCGCCG
ACTGCGGCAG GCGTTGCGGT GGCGGACGCG GAAACTCAGC AGCAGTCGAT AGAGTCTCCC
CCTGTTGGGG AAACGCCGGA TGGCGCCGGG GCGGCAGCGG ATGTGAGCGA CGTGGCGGTG
TCGTCTGATG GCGGCGATAG CCGCGAATCC GTCCGCGCCG CCGATGAGTC GCCGGCTGCG
GTGGCGGAAA GCGCCTCGGA AGCGCCGGTT CCTGCTGCTG AAACGCCGCC GACCGGGAGC
GCCGAAGTCG CGCCGGAAGC GGCGGCGCCT GCCGGTACTG CCGAAGCCGC AAGTTATCAG
GCGCCGGCTG AAGCGCCAAC CGGACGCCCG CGACGGGTGA AGGACCTGGC GCCCGGTATG
GAACTGGAAG GACGGGTCAC CTCGATTGCG CTCTACGGCA TCTTCGTTGA TATTGGCGTC
GGGCGCGACG GTCTGGTGCA TATTTCGGAG ATGAGCGACA CCCGTATCGA ATCGCCGAGT
GATCTGGTCA AGATTGGCGA TACGGTGAAG GTGCGGGTAA AGAGCGTCGA ACCCGATGGT
CGCCGGATCA GCCTGACGAT GCGCATGAAG GAGCGGGGCG CGGAACCGCG CAGTGGTCGC
GGCAAAAAGA AGCCCGAGGT GGATTACGAT AAACTTGCTG CGCTGCGCGT CGGCGATAAT
GTCGAGGGGA CGGTGACCGG GCTGGCGCCG TTTGGCGTGT TCGTCGATAT TGGCGTCGGC
AAGGATGGGC TGGTGCATGT GTCGGAACTG GCGGAAGGGC GCGTCGAAAA GGCTGAGGAT
GTCGTGCAGG TTGGTCAGAC CTATACCTTC AAGGTGCTGG AAGTCGATGC CGAGGGCGCT
CGCATCAGCC TGAGTCTGCG CCGGGCGCAG CGTGGTCAAA AGTTGCAGCA ACTGGAGAAG
GGGCAGATTC TCGAAGGCAC GATCAGCGGT CTGGCGCCGT TTGGCGCGTT CGTCGATATT
GGCGTCGGGC GCGACGGGCT GGTGCATATT TCTGAGTTGT CGAACGCGCG TGTGGCGCGC
GTCGAAGATG CGGTCAAGGT TGGCGATAAG GTGCAGGTGC GGGTGCTCGA TGTCGATCCG
CAGAGCAAAC GGATCAGCCT GAGCCTGCGG CTGGAGGATA CGCCGCGCGA GCCGCCGCCG
CGTGAGGAAC GACCGCGTGA GGAACGACCG CGGGAAGAGC GACCGCGCAT GGAGCGCGCA
GTGCGCAGCG AAGGGCGCCC GCCGCGTGAA GAGCGCCCGC CGCGGCGTGA GCGTGTCAGC
GATGCCTACT CCCCGGAGGA GGATGATTTT GGTGGGAATG CCACCCTCGA CGATTTGATG
TCGAAGTTCG GCGGACCGCG CCGCAGTGAG CGTCGCCGCC GCCAGGACGA TGACGATGAT
GTGGAAGACC GGAGTCTCCG CCGCCAGCGC GACGCTATTC GTCGCACGCT CCAACAACTC
GACGACGATT GA
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| Protein sequence | MTDQERPVEE RNELLGDSAP TAAGVAVADA ETQQQSIESP PVGETPDGAG AAADVSDVAV
SSDGGDSRES VRAADESPAA VAESASEAPV PAAETPPTGS AEVAPEAAAP AGTAEAASYQ
APAEAPTGRP RRVKDLAPGM ELEGRVTSIA LYGIFVDIGV GRDGLVHISE MSDTRIESPS
DLVKIGDTVK VRVKSVEPDG RRISLTMRMK ERGAEPRSGR GKKKPEVDYD KLAALRVGDN
VEGTVTGLAP FGVFVDIGVG KDGLVHVSEL AEGRVEKAED VVQVGQTYTF KVLEVDAEGA
RISLSLRRAQ RGQKLQQLEK GQILEGTISG LAPFGAFVDI GVGRDGLVHI SELSNARVAR
VEDAVKVGDK VQVRVLDVDP QSKRISLSLR LEDTPREPPP REERPREERP REERPRMERA
VRSEGRPPRE ERPPRRERVS DAYSPEEDDF GGNATLDDLM SKFGGPRRSE RRRRQDDDDD
VEDRSLRRQR DAIRRTLQQL DDD
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