| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1415 |
|---|
| Symbol | |
|---|
| ID | 5538888 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 1809566 |
|---|
| End bp | 1810666 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640893552 |
|---|
| Product | methicillin resistance protein |
|---|
| Protein accession | YP_001431528 |
|---|
| Protein GI | 156741399 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG2348] Uncharacterized protein involved in methicillin resistance |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.89632 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAAC ACGTGATTGA GCAGCATCCA GAACACGCAA TTGCGGTCGC CGCGGCGAGC
GTGGTCATAC CTGATCGGGC ATCCTGGGAT GCGTTCGTTC TGGCGCATCC CGACGGTCAT
CTGCTGCAAT CGTCGGGGTG GGGCGCGCTG AAAGCGCGTT TCGGCTGGAA ACCGCACCTG
CGCGCGGTCG TTGCCGACGG CATCATTCGG GCAGGCGCAC TGGCGCTGGA AAAGCAGCGG
TTTGGACTGA GCGCCCTGTA CCTTCCGCGC GGGCCGCTCT TCAGCGGCGA CAGGCGCCTT
GATGCGTTGT TGCTCGATGA TCTGGCGCGC CTGGGGCGCC GTCGCCGCGC TGTGTTCGTG
CGCGTCGAAC CCAATCTGAC CGAGGATGAT GCGCGCGCTG CTGCACTGCA CGCCATGCTG
ATCGACCGCG CTATGCACCC AATGGCGCCC ATTCAGCCAC GCAGCACCAT CCATCTCGAT
CTGACGCCGG AACCTGAACG TCTGTTGGCG GGCATGAGCA AAGGGCACCG CGCCGACATC
AAACGCGCCG CGCGGGAAGG GGTGGCGGTG CGGGAAGGAG ACCCTTCCGC CGATCTCGAC
GCCTTCTACG CCATTGTGCG GGAAACCGGC GCGCGCGCCC GATTCGCCAT TCACGCGCGC
GCGTACTACG CAAGCGTCCT GGAACTCTTT GGCGACGCGG TGCGCCTGTG GCTGGCAGAA
CGCGACGGCG CGCCGATTGC AACGGCGATG ACGGCAACGT GGGGAACAAC GGCAATCTAT
CTGTACAGCG GTTCGACGAC CAAAGGGTTA CAGTGCGGCG CCCAGCATGC CATTCAGTGG
CGCGCAATCC AGTGGGCGCG CGCGCGCGGC GCTGCCCGTT ACGATTTCTG GGGTATTCCC
GACGCGCTCG GGCAGGCAGC CGCAGCCGCC GATCCCGCCG CGCGCGCGCG CCTCGAAGCA
GAGGCGGAGC ACGACCCGCT CTACGGCGTC TATCGCTTCA AAAAAGGATT TGGCGGCGTG
ACGATCCGCT ACCTTCCGGC ATATGATTGT GTGCGCATTC CATTGTTGTA CACACTCTGG
CAACGACGCA TGCACGCATA G
|
|---|
| Protein sequence | MAKHVIEQHP EHAIAVAAAS VVIPDRASWD AFVLAHPDGH LLQSSGWGAL KARFGWKPHL
RAVVADGIIR AGALALEKQR FGLSALYLPR GPLFSGDRRL DALLLDDLAR LGRRRRAVFV
RVEPNLTEDD ARAAALHAML IDRAMHPMAP IQPRSTIHLD LTPEPERLLA GMSKGHRADI
KRAAREGVAV REGDPSADLD AFYAIVRETG ARARFAIHAR AYYASVLELF GDAVRLWLAE
RDGAPIATAM TATWGTTAIY LYSGSTTKGL QCGAQHAIQW RAIQWARARG AARYDFWGIP
DALGQAAAAA DPAARARLEA EAEHDPLYGV YRFKKGFGGV TIRYLPAYDC VRIPLLYTLW
QRRMHA
|
|---|
| |