| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1359 |
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| Symbol | |
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| ID | 5538831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1737500 |
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| End bp | 1738501 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640893496 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001431473 |
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| Protein GI | 156741344 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATTG ACACGATAAC AGAGATGCCG CACTCGACAC CAGACGATCT TGCCGGTGCA
GTAGCGCCAT CGGACGACGA GGTGCAGCCG CAGAACACCG TCATATGTGC GCCTCTTGAG
ACGCTGCTGG CGCAGGCGGC TGAGTCGCCG ACGGTTGCCG AGAATCTGGC GTATCGCTGC
CTGCGCCTGG CGGACACGCC GCAGGCGCAG GCAGCGCCAG ATGCGACTAT CGCGTTGTTG
ATGCGGGTAG CGGACATCTG CGCCGGAACA CTCAGTGAAG CGCATCCGGG GGTTGGCGCG
CTCCGCTGCT CTCTGGGAGA CCTGTTGCTT GCGACACGGC AGATAGAAGC AGCACGCCAG
CAGTATGAGA TGGTGCTGGC AGCGCACCGT TCCAATGTGT TCAGCGACAG TGCGATCATC
GCCTGCGCGC TCAGCGGTTT GGGTGATGCA TTGCGCGCCG AGCGCAAATA CACCGCAGCC
CTCATGTGTC TGCAACGCGC GCTGCGGCGG CAGTCCGAAC TGCATGGCGC GCATCCTGCA
ACGGCGCAGA CCCACACCCG CCTCGGCGCG CTCTGGTTCG AGCAGGGGCG TTATACCCAG
GCGCGCTTTC ACTTCCAGGA AGCGTTGGCG ATCCGCGAGG CCACGCTGGG AACACGGGAC
CCGGCGACAG CGCAGAGTCT GCACAATCTG GGCGTGACTC TGGCAGCGCT CGGCGATCTG
CGCAGTGCGC GCGTCTGTCT GGCGCAGGCG CTGGCGATCC GCGAGGATCG CCTGGGGCGC
GCGCACCTGG CGACGGCGCA CAGTCTGGAG GCGCTCAGTC GCGTATTGGC AGACCTTGGC
GATGATGAGA GCGCACAGTA CTGCCGCGAG CGCGCCGCCG CGCTGTACCG CGCGCAAGGG
GGCGATCGAC GAACACGGGG TGCGGCAGAG GCGATGGTGG AACGACAACC TCAGCAGCGC
GGCGGCGCGC GCTGGATGAA CCGGTTTCGG AGGAATGTAT GA
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| Protein sequence | MTIDTITEMP HSTPDDLAGA VAPSDDEVQP QNTVICAPLE TLLAQAAESP TVAENLAYRC
LRLADTPQAQ AAPDATIALL MRVADICAGT LSEAHPGVGA LRCSLGDLLL ATRQIEAARQ
QYEMVLAAHR SNVFSDSAII ACALSGLGDA LRAERKYTAA LMCLQRALRR QSELHGAHPA
TAQTHTRLGA LWFEQGRYTQ ARFHFQEALA IREATLGTRD PATAQSLHNL GVTLAALGDL
RSARVCLAQA LAIREDRLGR AHLATAHSLE ALSRVLADLG DDESAQYCRE RAAALYRAQG
GDRRTRGAAE AMVERQPQQR GGARWMNRFR RNV
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