| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1348 |
|---|
| Symbol | |
|---|
| ID | 5538820 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 1725458 |
|---|
| End bp | 1726393 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640893485 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001431462 |
|---|
| Protein GI | 156741333 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1216] Predicted glycosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGTGACC TCAGCATCGT AATCGTCAAC TGGAATACGC GCGACCTGCT GCGCGCCTGC
CTTGCGTCGC TGCACAACGC AGCGCGTCGC ATCGCGTGTG AGATTATCGT GGTCGATAAT
GCCTCAACTG ATGGCAGCAT CGAGATGGTC CGCGCTGCAT TTCCGCGTGT GCGCTTGATG
GCGCTGCCGG AGAATGTCGG CTTTGCCCGC GCCAACAACA TTGGGTTCGC TCAGGCGCAA
GGGCGCTATT TTCTGCTGTT GAACCCCGAT ACCTGGTTGC CGCCCGGCGC ACTGGATGAG
ATGATCGCGC TCATGGATCA GATGCCGAAT GTCGGCATTC TGGGTCCGCG ATTGTTGAAT
GCCGATGGCA GTCTGCAACC GTCGTGCAGC CGGTTTCCGA CGCCGCTCAA CATTGCGCTG
GATTGCTGGG GCATCAGTCG AATTGCGCCG CAAAACCGCA TGCTGTCTCG CTTCAAGATG
ACCTGGTGGG CGCACGATGA AGCGCGCGAG GTCGATCAAC CATCGGGGGC TTGCCTGCTG
GTTCGCCGTG AAGCCTGGCA CGAAGCCGGT CCGCTCGACG AACGCTTTTT CATGTATTTC
GAGGAAGTGG ATCTGTGCTG GCGCGTGCGA CGGGCTGGCT GGCGGACCTG CTTCACACCG
ACGCCGCAGA TCACGCACTA CGGAGGACAG AGTTCGCTCC AGAACCTTGA TGCGCGCATT
GTCCAGCGGT ATGCCAGTCT GGTGTTGTTC TTCCGTAAAC ACTATGGCGC ATTGACGACC
GGGGCGCTCT GCTGCGCCAT TACCCCGGCG GCGCTGGCGC GCGCACTGCT GGCAGCCATT
CGCGCGGCGA CGGCGGGGCA ACGACGGCAG TGGGAGTACG CTGCGCAATA CTGGCGCGTT
ACAACGCTGT TGTGTAGTTC GATGATGACC CGATAA
|
|---|
| Protein sequence | MCDLSIVIVN WNTRDLLRAC LASLHNAARR IACEIIVVDN ASTDGSIEMV RAAFPRVRLM
ALPENVGFAR ANNIGFAQAQ GRYFLLLNPD TWLPPGALDE MIALMDQMPN VGILGPRLLN
ADGSLQPSCS RFPTPLNIAL DCWGISRIAP QNRMLSRFKM TWWAHDEARE VDQPSGACLL
VRREAWHEAG PLDERFFMYF EEVDLCWRVR RAGWRTCFTP TPQITHYGGQ SSLQNLDARI
VQRYASLVLF FRKHYGALTT GALCCAITPA ALARALLAAI RAATAGQRRQ WEYAAQYWRV
TTLLCSSMMT R
|
|---|
| |