| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1337 |
|---|
| Symbol | |
|---|
| ID | 5538809 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 1714430 |
|---|
| End bp | 1715368 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640893474 |
|---|
| Product | acetamidase/formamidase |
|---|
| Protein accession | YP_001431451 |
|---|
| Protein GI | 156741322 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2421] Predicted acetamidase/formamidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAAC ACACACTCCG CCCCGACCAG GTCCATCACA AATGGGACAA CAGCCTGCCG
CCAGCCATCG AAATCGAGCC AGGCGACATT GTTCACTGCG AGACCGCTGA GGTGACGAAC
AACCAGGTAA CTCCTGGCTG CGATGCGTCG GTGCTGACGA ATCTCGATTT CGATCAGTTG
TACCCACTGG CAGGACCGAT CTTCGTCAAA GGCGCCGAGC CTGGCGATAT TCTCGAAGTC
GAGATTCTGC GCATGCAGAC GCTCGATTGG GGATGGACAG GCATCATTCC CGGTCTGGGG
CTGCTGGCGA ATGATTTTAC TGCGCCGTAT ATTCGGCACT TCGACCTGAG CAATGGCGTC
ACGGCGCCGC TGCGCGACGA CATTCACATC CCGATCCAGC CGTTTTGTGG CACTATGGGG
GTGGCGCTCG ATGAACCGGG CGCATTCGAC GTGCTGCCGT GCGGCAAGGC AGGCGGCAAT
ATCGACACAC GCCACCTGAA TGTCGGCGCA AAACTGTACC TGCCGGTTTT CGTGCCGGGA
GCGCTCTTCT CGTCAGGCGA CTGTCACGCG GCGCAGGGAG ATGGCGAAGT GTGCGTCACC
GGCATTGAGT GCCCAATGCA GTTCAGCCTG CGCTTCAACG TGCTCAAAGG ACGCAGTCTG
CGCCCCTGGA GCTATCAGTT CTTCACGCCG CCAGGACCGA TCCAGCCCGC CTATGACGAG
AAGGGATATT TCGTCACCAC GGCGATCGGA CCCGACCTGA TGACAAATGC GCAGAACGCG
GTACGCGACA TGATCGCGTG GCTGGAGCGT GAGAAAGGGT TGAGCCGCGA GGACGCTTAC
ATCCTGTGCA GTCTGGCAGG CGACCTGCGC ATCAGTCAGA TCGTAGACGC GCCTAACTGG
TGCGTGTCGT TCTACATGGC ATTGAGCGTG TTTCGCTGA
|
|---|
| Protein sequence | MAEHTLRPDQ VHHKWDNSLP PAIEIEPGDI VHCETAEVTN NQVTPGCDAS VLTNLDFDQL
YPLAGPIFVK GAEPGDILEV EILRMQTLDW GWTGIIPGLG LLANDFTAPY IRHFDLSNGV
TAPLRDDIHI PIQPFCGTMG VALDEPGAFD VLPCGKAGGN IDTRHLNVGA KLYLPVFVPG
ALFSSGDCHA AQGDGEVCVT GIECPMQFSL RFNVLKGRSL RPWSYQFFTP PGPIQPAYDE
KGYFVTTAIG PDLMTNAQNA VRDMIAWLER EKGLSREDAY ILCSLAGDLR ISQIVDAPNW
CVSFYMALSV FR
|
|---|
| |