Gene Rcas_1301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1301 
Symbol 
ID5538773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1679551 
End bp1679886 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content57% 
IMG OID640893439 
ProductDNA polymerase beta subunit 
Protein accessionYP_001431416 
Protein GI156741287 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.232434 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.452159 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCAT CGCCACACCA TTATGAACAT CTCCTGACCG AAGCCCATCG TCTGGCAGAT 
CAACTCCGCG CGCTCGGCGC AGTCCGGGTT ATCCTGTTCG GCTCACTGGC GCGAGGCGGT
GTATCACTAT TCAGCGACAT CGACCTGCTA GCGCTCTTCG AGAACTCTCG CTCGCCGCGC
GAATTGACGC GCTGGGTCTA CAGTGTCATT GACAGCAGTG AGAGCATTGA CATTCTGGCA
TACAGCATCG ATGATTTCGA GCGCATCAGG CAGCGTCCAT TCTGGAAACA CGCCCTGCAA
CACGCACAGG TGCTCTATGA ACGACCCACA ACGTGA
 
Protein sequence
MRASPHHYEH LLTEAHRLAD QLRALGAVRV ILFGSLARGG VSLFSDIDLL ALFENSRSPR 
ELTRWVYSVI DSSESIDILA YSIDDFERIR QRPFWKHALQ HAQVLYERPT T