Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1284 |
Symbol | |
ID | 5538756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 1656310 |
End bp | 1657758 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640893422 |
Product | MiaB-like tRNA modifying enzyme YliG |
Protein accession | YP_001431399 |
Protein GI | 156741270 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.323089 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAAG TTCATATTAT CACCCTTGGG TGCCCCAAAA ATCAGGTCGA TAGCGAGGGT ATGAGCGGCA TTCTGGCAGC GCAGGGGCAT ACGCTCGCTG CAAGCGCCGA TGATGCCGAT GTCGTGATTG TCAATACCTG CTCGTTTATT GCAGCGGCGC GGGAAGAAAC GCTGGCGGTG CTGCGCGATG TCGCTGCGTG CAAAACGCCC GAGCAGCGCC TGGTGGCTGC CGGTTGTATG GCGGAAAGTC ATCGCGCAAT CGTTGCAGCC ACGCCAGGAG TCGATGCGAC TCTCGGTACG CGCGAATGGA CGCGCATTGC TGAGGTGGTT GAGACATTTC AGCCCGCGGC GACGATGGCG CCGCTCAATG CTGCCTCCGC GCGCGAGATC ATTCCGCTCA CCAGCGCCGG TGTTCCATCT CCTGCTCCGC ACGACCTGAG CGTGCCAGGC GCCTACGCCG ACTGGCGCAC GGCGCCGATC CGCCGCCGCG CCGTCGGTCC TTCGGCATAT CTGAAGATTT CCGATGGGTG CAATCTGCGT TGTGCGTTCT GCACCATTCC GTCGTTCAAG GGCGATATGC GCTCCAAAGC CATAGGGGCG ATCCTCGGTG AAGCGCAGGA ACTGGCAGCG GCGGGCGTGA AGGAGATTGT GCTGGTGGCG CAGCATCTGA CCGATTATGG GCGTGATCTG GGACTGAAGG ATGGTCTGGC GATCCTGCTC GACGAGATCT GCGCTGTGCT GCCGGAGAAT GTCTGGGTGC GCTTGATGTA CGCTTACCCG CACGGGATCG GTGAGCGCCT GATCGCAACC ATGGCGCGCC ATCCGCAGAT CTGCCATTAT CTGGATATGC CGCTCCAGCA CGCGCATCCA GAGACGCTGC GCCGGATGCG GCGCCCGCCT GACACGGATC GCACCCGGCG GTTGATCGAT GACCTGCGCG CGGCAATACC CGACATCGCC ATTCGCTCGA CGTTCATCGT CGGTTTTCCC GGCGAGACCA ACACTGAGTT TCGGGCGCTG CTGGCGTTCC TCGAGGATGT GCAGTTTGAT CGGGTCGGCG TGTTCCGCTA TTCACGCGAA CCGGGAACGC CGGCCGCCGC TTTGCCCGAT CAGTTGGCGC CTCGGATCAT CGAGCGTCGC TGGCATGAGA TCATGCGGCT TCAGCAGCGA ATCTCGCGCG AACGCAACCG GCGCTGGCTC GGGCGCGTCG TGCGTGTGCT GGTTGAGGGT CAGGGGCAGA CCGACGATGG GCGGATGTTG AGCGTCGGTC GGTCGTTCCG TGATGCGCCT GAAGTCGATG GACAGGTGTT GTTCTGGGGC GCAGCAACTC CTGGCACATT CGTCGATGTG CGCGTGACAC AGGCGCTCGA TTATGACCTG TGGGGCGATG TCGTCGGCGT GCTCGACGGT GAAGAGAGGA TTGTGAAGTG CATCCAGAGC GTTGGATAG
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Protein sequence | MMKVHIITLG CPKNQVDSEG MSGILAAQGH TLAASADDAD VVIVNTCSFI AAAREETLAV LRDVAACKTP EQRLVAAGCM AESHRAIVAA TPGVDATLGT REWTRIAEVV ETFQPAATMA PLNAASAREI IPLTSAGVPS PAPHDLSVPG AYADWRTAPI RRRAVGPSAY LKISDGCNLR CAFCTIPSFK GDMRSKAIGA ILGEAQELAA AGVKEIVLVA QHLTDYGRDL GLKDGLAILL DEICAVLPEN VWVRLMYAYP HGIGERLIAT MARHPQICHY LDMPLQHAHP ETLRRMRRPP DTDRTRRLID DLRAAIPDIA IRSTFIVGFP GETNTEFRAL LAFLEDVQFD RVGVFRYSRE PGTPAAALPD QLAPRIIERR WHEIMRLQQR ISRERNRRWL GRVVRVLVEG QGQTDDGRML SVGRSFRDAP EVDGQVLFWG AATPGTFVDV RVTQALDYDL WGDVVGVLDG EERIVKCIQS VG
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