Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1220 |
Symbol | |
ID | 5538687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 1577621 |
End bp | 1578862 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640893353 |
Product | ErfK/YbiS/YcfS/YnhG family protein |
Protein accession | YP_001431335 |
Protein GI | 156741206 |
COG category | [S] Function unknown |
COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.68044 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCTC GCCCCTGGTA TGCACCGCTC ACAATGATCG GCATCGTGGC GCTGACGACG CTGGCGCTTG TGGCGCCTGC CGAACTGCGC GCGCGGCAGC GCCCCACAGT CGCCGATTTT GCGCCGCCAA TGACGCCATC CGAAGCGCAG GCGATCGTCG CCGCCGCGCG CGCTGCCGAA CGCGCGCAAC GCATCGAACA GATGCAGCAA CAGAGCGGGC AGGATGCGGT TCCACTGCCG GCCGTGCAAA ACATGTATTT CGCGTCCTCC GGCTTTCACA TCAGCGACCG CACCGGATTC CTGAGCTTCT GGCGCAGGAA CGGCGGCGAT CTGATTTTCG GGTATCCGAT CAGCGGCGAA ATGGTCGAAG ATGGGCGGAT CGTCCAGTAT TTCGAGCGCG CCCGCTTTGA GTACCATCCC GAACATCTGG GAACTGACTA CCAGGTGATG TTGTCGCTCC TTGGCAACGA ACTGACCCAG GGGTACGATT TTCCCGATGG ACAGCCGACG CAGGGGCGGA TCTACTTTCC CGAAACACGT CAGACGCTTG GCGGCAAGTT TCTGAAGTTC TGGCAGAAGC GCGGCGGGTT GCGCATCTTT GGCTACCCGA TCAGCGAACC GTTCGAGGAA ATCAGCCCGA TTGACGGACA GGTGCGCATC ACGCAGTATT TCGAGCGCGC GCGCTTCGAG TACCACCCAG AGAAACTTCC GGCGTTCTAT CGCCAGATGG AACGGGCAAA CGGGATTATG CTCGCCGGAC TCTACGAAGT CCAGTTGACC GATCTGGGAC GGCAGGCGAT GCAACGCCGG GGACACACGC CGCAGTCAAC CGGTCCGATG CCCGGCGCGC CGGTCTGGTC ATCTGCATTA TTCGAGCGAC GCATTGAGGT AAATCTCTCA ACGCAGATGC TGACGGCATT CGAGGGGGAG GCGCCGGTCT ATCGCGCCCC GGTTGCAACC GGACGCGACG GTTTCAATAC GCCGGTTGGA ACATTCGCCG TGTACTCCAA ACTGCCGATA CAAACGATGA CCGGCTCGGC GGGCGGCGAG TCGTGGTATG TGCCCGATAT TCCATGGGTG CAGTATGTGG TTGGCGGCGT GGCGCTCCAC GGCACCTACT GGCACGACGC CTGGGGCACA GGGGTGCGTA TGTCGCACGG GTGTATCAAC CTGAATATCG ATGACGCGGA ATGGCTGTAT CGCTGGACGG ACATTGGAAC CCGGGTGGAT ATTATTGACT GA
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Protein sequence | MTSRPWYAPL TMIGIVALTT LALVAPAELR ARQRPTVADF APPMTPSEAQ AIVAAARAAE RAQRIEQMQQ QSGQDAVPLP AVQNMYFASS GFHISDRTGF LSFWRRNGGD LIFGYPISGE MVEDGRIVQY FERARFEYHP EHLGTDYQVM LSLLGNELTQ GYDFPDGQPT QGRIYFPETR QTLGGKFLKF WQKRGGLRIF GYPISEPFEE ISPIDGQVRI TQYFERARFE YHPEKLPAFY RQMERANGIM LAGLYEVQLT DLGRQAMQRR GHTPQSTGPM PGAPVWSSAL FERRIEVNLS TQMLTAFEGE APVYRAPVAT GRDGFNTPVG TFAVYSKLPI QTMTGSAGGE SWYVPDIPWV QYVVGGVALH GTYWHDAWGT GVRMSHGCIN LNIDDAEWLY RWTDIGTRVD IID
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