| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1215 |
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| Symbol | |
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| ID | 5538681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1569455 |
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| End bp | 1571053 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640893347 |
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| Product | NLP/P60 protein |
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| Protein accession | YP_001431330 |
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| Protein GI | 156741201 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.35545 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGAGC AAAGTCATCG AGGTATGGCA TCGGACCCGT ACAGCCTCGA GTCGCTTCAG
CGCCGCGCGC TCGCTCGGAG GAGACAACAA ACATCACTCA CCCGTGCACT CGCAACTCAA
TGGCAAACGG TTCGGTCCGC CCGGTTCAGT TCCCCCTCTG CTCTTCTCGC CCGTCTTCCG
GCTCGCGTTG TTCTCCATGC GCTGGTTGCG CTGCTTCTCC CCGTCGCAAT GCTGCTGTCG
CAGTTGCGTC CGGGGGTGTT GACGCCAGTC GCTCCGGCCC CGGCTGCTCC GGCGGAGGGG
AGCGAGTTCA CCGTGCCGCT GACGCCGATC GACCTCGATG CCACGGTGGG CGATGCGCCG
CTGGAAGAAA CCGCCGACCT GCCGGTGCCG CTTTCGCTTA TTTCACGAAG CGAAGCGCTG
GCGCCGATCG TCGTCCCGGC GACGGTCGCG GTCGAGCGCG CCTTTCTGCG GAACGGTCCC
GGCACGGAGT ATGATGCGGT CGGGCGCATT TCCGGCGAGA CGCCGGTGCA GGTCATCGGT
CGCTATGGCG ACTGGTTTCA GGTCCGTGAA CGGGTTGATG GCCCGATCTA CTGGATTTCC
GGTGAGGTGC TTGCTATCTC AGAGGCAGCG TCCTACACAC TGTTTGAAGT GCAGGAGAGC
GCCATCCCGC CGCCGCCGCC GCCCAAGATC GCAACCGTGC GCGAAAGCGG TCTTCAGTTG
CGCGATGGTC CCGGAACGAA TTATGTGTCG ATGACGACCC TGCAACAGCA TACGCAGGTC
GAATTGTACG AAATCTATCA GGACTGGTTC CACATCGGCG CTCCTGGCGG ACTCGATGGG
TGGGTGAAGG CGGAGTTCCT GAATGTTGAT CCCTCGGTCG TCAAGCGATT GCTGGTCGCC
GAAACCATTC CCGATCCGAA CCCGGCGCTG GTGGGTGTTA TTGCAGAAAA TAGCGTCAAC
CTGCGCAAGG GTCCCGACTC GCGCTACGAC CGGATCGGTC GGATCGATGC GGGGGTGCAG
GTCGATCTGA TCGGCAAGCA TAAGGATTGG CTGCGGGTGC GGCTGCCCGA CGGCACAAAG
GCCTGGGTGT TTCGCGATCT GATCAGCACC ACAGCGCACG TGTTGCGGCG GGTGCCGGTC
AGCCGCGACT TCCCGGCGCT GCCGGTGAGC GGCGGTCGCC CCGGCGCGAG CGCCGGTTTG
GCGAATATTC CGGCCAGCGG TGATATCGCC AGTTTTGCCG TACAGTTCGT CGGGGCGCGC
TATCGCTGGG GCGGCTCAAG CCCGGCGACC GGCTTTGACT GTAGCGGGTT CACCAGTTAT
GTCTATCGAC AGTTTGGCGT CAATCTGCCG CGCAGCGCCG CTTCGCAGTT CAATACTGCG
TATGGAGCGT CGGTCGGTCC GATGGAAAAT CTGGCGCCCG GCGATCTGGT CTTCTTCCGC
AATACCGGCG GGCGGCGCGG CATCAGTCAT GTGGCTCTCT ACATCGGCGG CGGGCGCATG
GTGCATGCCA TGACGCCACG CTACGGTGTG CAGGTGTCGA GCATCTGGGG GTCGTACTGG
ACATCGCGCT ACTACGGGGC TATCCGGGTG CGCCGGTAG
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| Protein sequence | MIEQSHRGMA SDPYSLESLQ RRALARRRQQ TSLTRALATQ WQTVRSARFS SPSALLARLP
ARVVLHALVA LLLPVAMLLS QLRPGVLTPV APAPAAPAEG SEFTVPLTPI DLDATVGDAP
LEETADLPVP LSLISRSEAL APIVVPATVA VERAFLRNGP GTEYDAVGRI SGETPVQVIG
RYGDWFQVRE RVDGPIYWIS GEVLAISEAA SYTLFEVQES AIPPPPPPKI ATVRESGLQL
RDGPGTNYVS MTTLQQHTQV ELYEIYQDWF HIGAPGGLDG WVKAEFLNVD PSVVKRLLVA
ETIPDPNPAL VGVIAENSVN LRKGPDSRYD RIGRIDAGVQ VDLIGKHKDW LRVRLPDGTK
AWVFRDLIST TAHVLRRVPV SRDFPALPVS GGRPGASAGL ANIPASGDIA SFAVQFVGAR
YRWGGSSPAT GFDCSGFTSY VYRQFGVNLP RSAASQFNTA YGASVGPMEN LAPGDLVFFR
NTGGRRGISH VALYIGGGRM VHAMTPRYGV QVSSIWGSYW TSRYYGAIRV RR
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