| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1214 |
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| Symbol | |
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| ID | 5538680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1568232 |
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| End bp | 1569299 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640893346 |
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| Product | glucose-1-phosphate thymidyltransferase |
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| Protein accession | YP_001431329 |
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| Protein GI | 156741200 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
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| TIGRFAM ID | [TIGR01208] glucose-1-phosphate thymidylylransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.383113 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGGAC TGGTTCTCAG CGGCGGCAAA GGAACTCGCC TGCGCCCCAT CACCTATACT
AGCGCCAAGC AACTGGTGCC GGTCGCCAAC AAACCGGTGC TCTTCCGCGT CATCGAGACG
ATCCGTGATG CCGGCGTCGA AGACATCGGC ATCGTAATCG GCAGCACCGG ACCCGAAGTG
CGCGCCGCCG TCGGCGATGG CGGTCGCTGG GGCGTGCGGA TCACCTACAT CGAACAGGAC
GAGCCGCTGG GGCTGGCGCA CGCCGTCAAG ATTTCACGCG ACTTTCTGGG GGATGACCGA
TTTGTCATGT TCCTGGGCGA TAACTGCATT CAGGGCGGGA TTGCGCCCCT GCTCCAGCAG
TTTGGCACGA GCGACTTCAA TGCACAGATC GTCCTCAAGC AGGTCGCTAC CCCTGAGCAG
TATGGCGTCG CTGTTCTCGA CGAACGCGGA CAGATCGTGC GGTTGATCGA AAAACCGCGT
CAACCTCCAT CCGACCTGGC GCTGGTTGGC ATTTATATGT TCGACGCAAG CATCTGGGAA
GCGGTAGAAG CGATTCGCCC GTCGTGGCGC GGCGAACTGG AAATCACCGA CGCGATCCAG
TGGCTGGTGG AGCATGGGCG ACGCGTCTTC CCCTACATTC ACCACGGTTG GTGGATCGAC
ACCGGCAAGA AAGACGACAT GCTGGAAGCA AATCGCCTGA TCCTGGAGGA AATGCCGGCA
TCGGTCGAAG GATTTGTAGA CCGCGACTCG CACCTGATCG GCAAGGTCAT TGTCGAGCGA
GGGGCGGAAA TCATCAACAG CACCATCCGT GGACCGGCGA TCATTGGTGA ACAGACACGC
ATTATCAATG CCTATATTGG TCCATTCACC TCGATTTATC ACCACTGCGT CATCGAAAGC
GCCGAGATCG AGCATTCAAT AGTGCTGGAG CACTGCACCA TCCGCGACCT GCCCCACCGC
CTGGAAGACA GTTTGATCGG GCGGCACGTC GAGGTCACAC GTTCACCGCG GAAACCCAAG
GCGTACCGCC TGGTGCTGGG AGATCACTCG AATGTTGGCG TGCTGTAA
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| Protein sequence | MKGLVLSGGK GTRLRPITYT SAKQLVPVAN KPVLFRVIET IRDAGVEDIG IVIGSTGPEV
RAAVGDGGRW GVRITYIEQD EPLGLAHAVK ISRDFLGDDR FVMFLGDNCI QGGIAPLLQQ
FGTSDFNAQI VLKQVATPEQ YGVAVLDERG QIVRLIEKPR QPPSDLALVG IYMFDASIWE
AVEAIRPSWR GELEITDAIQ WLVEHGRRVF PYIHHGWWID TGKKDDMLEA NRLILEEMPA
SVEGFVDRDS HLIGKVIVER GAEIINSTIR GPAIIGEQTR IINAYIGPFT SIYHHCVIES
AEIEHSIVLE HCTIRDLPHR LEDSLIGRHV EVTRSPRKPK AYRLVLGDHS NVGVL
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