| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1198 |
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| Symbol | |
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| ID | 5538664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1548155 |
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| End bp | 1549339 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640893330 |
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| Product | patatin |
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| Protein accession | YP_001431313 |
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| Protein GI | 156741184 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0901523 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA GTGGCGTCAC ACGGCAACGG AGCAAGACGG CGTTGGTTCT GGCGGGCGGC
GGGGTGACCG GCGCCGCCTA CGAAATTGGC GCGCTCCGCG CGCTCGACGA CCTCCTCTCC
GACTTCAGCG TCAACGATTT CGATGTGTTT ATCGGCACCA GTGCGGGTGC GCTGGTGGCC
GCCTGTCTGG TCAATGGGTT GACGCCGCGT GAGTTGATGC GTCATCTTGA GACGCCACTC
GACGGTATCG CGCCGCTCAA TATGGGAGAT CTCTTTACGC TCAACGGGCG CGATATTCTG
GCGCAGGGGC TGCATCTGCC GAACGTGGCG CTGCGCGCGC TCCAGGCGCT CATCTTTTCG
CGGAAGCACC TCTCGCTGCT TGATCTGATC GAGGCGTTTG CCCTGGCGTT GCCGGGAGGG
TTGTACGATA TCGGCTCGCT CGACCGCTAC CTCAGTGCGG TGCTGTCGCG TGATGGCAGA
ACGAACGACT TCCGCCGTTT ATCCCGCGAA CTGGTGATCA TTGCGACCGA TCTGGATACC
GGTGCGCGCG TCGTGTTTGG CGCTCCGCCC TATGATGATG TGCCCATTTC TCAGGCAGTC
GCTGCGTCGT CGGCGATGCC GATGGTGTAT CGCCCGGTGC GGATTGGCGA CCGCGATTAT
GTTGATGGCG GAGTGCGCGG CAATGCCAGC CTCGACCTGG CGATTGAACG TGGCGCGCGC
CTGATTGTGT GTGTCAATCC GCTGGTTCCT TACGATCTCG AAGAAGCGAA CGACAATTCT
ATTCACATTC GCGATATGGG AGCGCCCGGG ATTGTCAATC AGGTCTTTCG CACACTGTTC
CACTCGGCGC TGCATTACCA TCTGAAGCAG ATCCACCGCC GCCACCCCGA TGTCGATATT
ATTCTGATCG AACCGGCACG CGACGATGTG CGCATGTTCT CCGAGATGCC GATGCGCTAC
TCCAGTCGCA CCGAAGTGGC GCGCCATGGT TTTGAGACGG TGGCTGCGTT CCTGAGCGAG
CGGTACGAGA GTTATCGGAG CATCTTCGCG CGCCATGGGA TTACGCTCCA GCATCAGCAG
GCTGCCGAGC GCCTGGCCAC TGTGGCGCAC AATGTCAACG TTCGGCGCCC CGGTCCGCGC
GACCTGCGCG ATACTCTTGC GCGCCTGGAA CGGTTGCTCG AATAG
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| Protein sequence | MSDSGVTRQR SKTALVLAGG GVTGAAYEIG ALRALDDLLS DFSVNDFDVF IGTSAGALVA
ACLVNGLTPR ELMRHLETPL DGIAPLNMGD LFTLNGRDIL AQGLHLPNVA LRALQALIFS
RKHLSLLDLI EAFALALPGG LYDIGSLDRY LSAVLSRDGR TNDFRRLSRE LVIIATDLDT
GARVVFGAPP YDDVPISQAV AASSAMPMVY RPVRIGDRDY VDGGVRGNAS LDLAIERGAR
LIVCVNPLVP YDLEEANDNS IHIRDMGAPG IVNQVFRTLF HSALHYHLKQ IHRRHPDVDI
ILIEPARDDV RMFSEMPMRY SSRTEVARHG FETVAAFLSE RYESYRSIFA RHGITLQHQQ
AAERLATVAH NVNVRRPGPR DLRDTLARLE RLLE
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