| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1194 |
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| Symbol | |
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| ID | 5538660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1543066 |
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| End bp | 1543416 |
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| Gene Length | 351 bp |
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| Protein Length | 116 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640893326 |
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| Product | anti-sigma-factor antagonist |
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| Protein accession | YP_001431309 |
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| Protein GI | 156741180 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
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| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.179967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAGATTA CGCACAAACG GCTGAATCGT GTCGATCTCT TGACGATCAC AGGGCGGCTC
GATGCGATGA ACGCGCCCCA ACTCAAGCAG AAGTTCGACG AACTGTTCGA GCAGAATCGC
TATCGGATCG TGCTCGACCT GTCTGGTCTC GAATACGTGG CCAGCCCTGG GTTACGCGTT
CTGATCGAGG CGCGCAAGCG CGCGCGCGAT TGGAAACTGA CGGATCTCGA AGGGGGCGAT
GTGCGTATCG CCAATCTCCC ACCACGGATC AAAGAAGTCT TTGATCTGAC CGGCTTCACC
TCGCTGTTCG AGATCTATGC CGATACAGTC GAAGCGGTCG GTTCGTTTTG A
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| Protein sequence | MEITHKRLNR VDLLTITGRL DAMNAPQLKQ KFDELFEQNR YRIVLDLSGL EYVASPGLRV
LIEARKRARD WKLTDLEGGD VRIANLPPRI KEVFDLTGFT SLFEIYADTV EAVGSF
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