| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1183 |
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| Symbol | |
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| ID | 5538649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1527027 |
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| End bp | 1528784 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640893315 |
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| Product | sulfate transporter |
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| Protein accession | YP_001431298 |
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| Protein GI | 156741169 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
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| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor
[TIGR00815] high affinity sulphate transporter 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.500154 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.430709 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGTCT CTTCGTCGCT TAAAACGCCG CTGACCGGTC AGGGTCTCCG GCGTTATTTT
CCGTTTCTCG ACTGGCTGCT CCACTATCGC CGGTCTGATC TCCCAAACGA CCTGGTCGCC
GGTCTGGTGA CGGCAATCAT GCTCATTCCG CAGAGCATGG CGTATGCCCA GCTTGCCGGT
TTGTCGCCAC AGGTCGGGTT ATATGCATCG GTTGCGCCGC TGGCGATCTA CGCATTGCTC
GGCACCTCCG GGCAACTGTC GGTCGGTCCG GTCGCCATCA CGTCGCTGGC GGTCTTTGCC
GGCGTCAGCG CCCTCGCCGA GCCGGGGAGT TCGCGCTATC TGGAATTGGT GTTGTTGCTG
GCGTTTATCG TGGGGCTGGT CAAACTGCTG CTGGGGTTGC TGCGTCTGGG CTTTGTGATG
AACTTTGTGT CGCACCCGGT GCTGGCGGGG TTCACCTCTG CGTCGGCGTT GATCATCGCT
GCCGGGCAAC TGAAGTATCT GCTTGGCTAC CGGATCGAAG GCGAACATGT CCATGAGATT
GTTCTGAACG CGGTTGCCGG TGTGAACCAG ACGAACCCGG CGACCCTGGC GATCGGCGCG
ATCAGCATTG CCTTACTCAT CCTGTTTCGT TCGCAGTTGA AGCCGCTCTT GCAGCAGCGC
ACGCGCCTGC CCGCCGCCGC TGTGACCCTG ATCGTCAGCG GTGCGCCGCT GGTGACGGTG
CTGCTCGGCA TTCTGGTGTC GTGGTTCTGG CGGTTGAACG AGACTGCCGG GGTGCGGGTG
GTTGGCGCCA TTCCTCAAGG ATTTGCGCCG TTCACCCTGC CAACATGGAG CGCTGCCGAC
GCACAGGCGC TTCTGCCCAC AGCAATGACG ATCGTCTTCA TCAGCGTTGT CGAGTCGATC
GCAGTCGCCA AGGCGCTAGC GAGCAAGCGC CGCAAGGCGA TCAACGCCGA TCAGGAGTTG
GTGGCGCTCG GCGCTGCCAA TCTGACAGCC AGCGTCACCG GTGGCTATCC CGTCACCGGC
GGCTTTGCCC GCTCGGTGGT CAACGATCAG GCGGGCGCCG TGACCGGTCT GGCATCGCTG
GTGACGGCAG CGAGCATTGG CATAATTGTG CTCTGGTTCA CCCCGTTGTT CTACTACCTG
CCACAGGCAG TGCTGGCAGC AACGGTTATC GTTGCGGTGT TGAGCCTGTT CAAACCGGGT
GAAGCGCTGC GCATCTGGCG CATGAACCGC ACCGACGCAG TGACGTGGGG AGTGACATTC
GCCGTCGTGC TGTTGTTCGG CATCGAGGCT GGCATTCTGG CGGGGGTAGT CTTTGCCATT
CTGCTCTTCC TCTGGCGCAC CAGCCGACCA CACATCGCCA TCGTTGGGCG GGTTGGTCAA
AGCGAGCATT TCCGCAATGT GCTGCGCCAT CAGGTGCAGA CCTGCCCGCA CGTCGTAGCA
GTGCGCGTTG ATGAAAGCCT CTACTTTGCC AATACGCGCT ACCTGGAAGA CGCGCTCCTG
CGCATCGTCG CTGAACGACC AGAAGTGAAG CATCTGGTGC TGATTGGCTC GGCGATCAAT
TTCATCGACG CCAGCGCAAT GGAAACGCTG GAATCGCTGC TCCGCGAATT GCGCGCCGCC
GGGGTCGCGT TGCACCTGGC GGACATCAAG GGACCGGTGA TGGATCAACT GCAACGCGCC
GGCTTTATTG ATCACCTTGG CGCCGAACGA GTCTACCTGA GCACGCATCA GGCAATGCGG
GCGCTGGAGT GTGTTTGA
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| Protein sequence | MAVSSSLKTP LTGQGLRRYF PFLDWLLHYR RSDLPNDLVA GLVTAIMLIP QSMAYAQLAG
LSPQVGLYAS VAPLAIYALL GTSGQLSVGP VAITSLAVFA GVSALAEPGS SRYLELVLLL
AFIVGLVKLL LGLLRLGFVM NFVSHPVLAG FTSASALIIA AGQLKYLLGY RIEGEHVHEI
VLNAVAGVNQ TNPATLAIGA ISIALLILFR SQLKPLLQQR TRLPAAAVTL IVSGAPLVTV
LLGILVSWFW RLNETAGVRV VGAIPQGFAP FTLPTWSAAD AQALLPTAMT IVFISVVESI
AVAKALASKR RKAINADQEL VALGAANLTA SVTGGYPVTG GFARSVVNDQ AGAVTGLASL
VTAASIGIIV LWFTPLFYYL PQAVLAATVI VAVLSLFKPG EALRIWRMNR TDAVTWGVTF
AVVLLFGIEA GILAGVVFAI LLFLWRTSRP HIAIVGRVGQ SEHFRNVLRH QVQTCPHVVA
VRVDESLYFA NTRYLEDALL RIVAERPEVK HLVLIGSAIN FIDASAMETL ESLLRELRAA
GVALHLADIK GPVMDQLQRA GFIDHLGAER VYLSTHQAMR ALECV
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