| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1173 |
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| Symbol | |
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| ID | 5538639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1517806 |
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| End bp | 1518798 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640893305 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001431288 |
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| Protein GI | 156741159 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.848651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.375032 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACAGG CAAAGACGCT CAGCGCACAT CCCGCCCGTC GAGTGCGCTG GATGAACCGG
GATCGGGCGG TTGCACTGTT GATGATCGCC CCATCGGCGC TGGCAATCGC CGTCTTCGTC
TATGGTTTCA TCGGTTGGAC CGCCTACATT TCCATGACCG ACTGGCGTGG ACTGGCAATA
TCCACGTCGT TCGTCGGGTT CGACAATTAC CTGACGATCT TCAGCACCGC GCGATTCCAG
ACGAATATCC GCAACCTGAT CGTCTTTACG GTCTTCTTTC TGGCGTCTTG CCTGGTGATC
GGGCTGTTAC TCGCGGTGCT CGTCGATGCA CGGGTGCGCT TCGAGGGGTT CTTTCGCTCG
GTCTACATCT TCCCGATGGC GCTCTCGTTC ATCGTAACCG GCGTTGTCTG GCAATGGTTG
TTTGCACCGG GCAACTGGCC CACTGATCCG ACCGGGATCA ACCTGCTGTT CAAGCAGTCG
GGCTTTGGTT TTCTCCAGGC GGCATGGACG ACCGATACGA ACATTGTGCC GGGATGGCGC
ATCGAAGGAT TACGCACCCG GATTGGCATC CCAATGGCGA TGATTCCGGT TGTTGTTGCG
GCAGTCTGGC AGATGTCGGG GTTTGTGATG GCGATGTATC TGGCGGGTTT GCGCGGCATT
CCAGAAGAAA TCAAAGAAGC GGCACGGGTC GATGGTGCGA CTGAGTGGCA GGTGTTTCGC
ACTATTACGC TGCCGATGCT TCAGCCGATT ACATTGAGCG CCGTTATTAT TCTGGGGCAT
ATTTCGCTGA AGATTTTCGA CCTGATCGTC ACGATGACCG GTGGCGCGCC CGGCAACAAT
ACCGAGGTGC CCGGGTTGTA TATGTACGAA ATCACCTTCA AAGCCAACAA GTTCGCCGAA
GGCGCAGCGG TGGCAATGGT GATGCTGGTC GTCGTCGCCG TGCTGGTGGT GCCGTATCTG
ATCTATAACC GTCGAACAGA GGTGGAACGA TGA
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| Protein sequence | MRQAKTLSAH PARRVRWMNR DRAVALLMIA PSALAIAVFV YGFIGWTAYI SMTDWRGLAI
STSFVGFDNY LTIFSTARFQ TNIRNLIVFT VFFLASCLVI GLLLAVLVDA RVRFEGFFRS
VYIFPMALSF IVTGVVWQWL FAPGNWPTDP TGINLLFKQS GFGFLQAAWT TDTNIVPGWR
IEGLRTRIGI PMAMIPVVVA AVWQMSGFVM AMYLAGLRGI PEEIKEAARV DGATEWQVFR
TITLPMLQPI TLSAVIILGH ISLKIFDLIV TMTGGAPGNN TEVPGLYMYE ITFKANKFAE
GAAVAMVMLV VVAVLVVPYL IYNRRTEVER
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