Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1160 |
Symbol | |
ID | 5538626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 1503436 |
End bp | 1504506 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640893292 |
Product | myo-inositol-1-phosphate synthase |
Protein accession | YP_001431275 |
Protein GI | 156741146 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1260] Myo-inositol-1-phosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAAGA AAGTTCGTGT TGCAATCATC GGTGTCGGCA ACTGCGCCTC GTCACTGGTG CAGGGAGTCG AGTACTATCG CAACGCCCGA ACCGATGAGT TCGTTCCAGG TTTGATGCAC GTCAACCTCG GCGGCTATCA CATTGGCGAT ATCGAGTTTT CAGCAGCATT CGACATCGCC GATACGAAAG TCGGCAAAGA CCTCTCGGAG GCAATCTTCG CGCCGCCGAA CAATACATAC CGCTTCGCGC ATGTGCCACA CCTCGGCGTG CCGGTACATC GCGGGATGAC CCACGACGGT CTGGGAAAAT TTCTGAGCCA GAAGGTGCAT AAAGCGCCGG GGGCGACTGA TGACATCGTC AATATTCTGC GCTCCACCCG CACCGATGTC GTCGTGTCGT ATCTGCCGGT TGGCAGCGAA ATGGCGACGA AGTGGTATGT CGAGCAGATC CTGGATGCCG GGTGCGGCTT CGTCAACTGT GTGCCGGTGT TCATCGCCAG CCAGGCGTAC TGGCGCAAAC GCTTCGAGGA GCGCGGATTG CCGATCATCG GTGATGACAT TAAGAGCCAG GTTGGCGCCA CCATCACGCA TCGTGTGTTG ACGGCGCTAT TCCGCGATCG CGGCGTGCGC CTCGACCGCA CCTACCAGTT GAACTTCGGC GGCAATACCG ATTTTTACAA CATGCTCGAA CGGGAGCGCC TGGAGAGCAA GAAGATCAGC AAAACCAACG CCGTCACCAG CCAACTCGAT TACGATTTGC CCGACGACGC GGTGCATGTT GGTCCGAGTG ATTATGTGCC CTGGCTGGAA GATCGCAAAT GGTGTTACAT TCGCATGGAG GGCACCACGT TCGGGAATGT GCCGATCAAT CTCGAATTGA AACTGGAAGT CTGGGATTCG CCCAATTCGG CTGGTGTTGT CATCGATGCC GTGCGCTGCG TCAAACTGGC GCTCGACCGC AACATTGCCG GCGCGCTGGT CGGACCGAGC GCCTATTTTA TGAAGACGCC GCCGCAACAG ATGACCGACA ATGAGGCGCG TCGGTTGACG GAAGAGTTCA TCGCCGGGTG A
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Protein sequence | MSKKVRVAII GVGNCASSLV QGVEYYRNAR TDEFVPGLMH VNLGGYHIGD IEFSAAFDIA DTKVGKDLSE AIFAPPNNTY RFAHVPHLGV PVHRGMTHDG LGKFLSQKVH KAPGATDDIV NILRSTRTDV VVSYLPVGSE MATKWYVEQI LDAGCGFVNC VPVFIASQAY WRKRFEERGL PIIGDDIKSQ VGATITHRVL TALFRDRGVR LDRTYQLNFG GNTDFYNMLE RERLESKKIS KTNAVTSQLD YDLPDDAVHV GPSDYVPWLE DRKWCYIRME GTTFGNVPIN LELKLEVWDS PNSAGVVIDA VRCVKLALDR NIAGALVGPS AYFMKTPPQQ MTDNEARRLT EEFIAG
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