| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1156 |
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| Symbol | |
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| ID | 5538622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1495867 |
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| End bp | 1496676 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640893288 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001431271 |
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| Protein GI | 156741142 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAACA TTCAGAAAAC GATAGTGCTC ATCACCGGCG CTTCATACGG CATTGGCGCT
GCGACGGCGC GGGCATTCGG TCGTCGGGGG GCGCATGTGC TCCTGCTGGC GCGCACACAG
TCGGCGCTGG AAGACGTGGC GCGCGATATT CGCGCATCAG GAGGCGCAGC ATCGGTCTAT
CCGGTCGATC TGACCGACGC GCGCGCGGTA GAGGAGGTGG CGCAGCAGGT GCTCGCTGCG
TTTGGTCCGC CCGATATTCT CCTGAGCAAC GCCGGCGCGG GGCGCTGGCT GTTCATCGAC
GAGACGACGC CGGATGAAGC CGTTGCAATG ATGGCGATGC CGTACTTTGC CGCTTTCTCC
ATTACCCGCG CATTTTTGCC TTCGATGCGC GCGCGCGGGA GGGGCCATCT CGCGTATGTC
AACTCACCGG CGTCGCTGGT GGCGTGGCCC GGCGCGGCTG CGTACACCGC CGCGCGCTGG
GCGCTGCGTG GCTTTGTTGA AGCGCTGCGC GCCGAATTGC ACGGTACGCG CCTGCGGGTC
ACGACGATTA TTCCGGGGCT GGTTGCAACG ACGTATTTTG AGCATAACCC TGGTGTCCTG
GAGCGTGTGC CAGGGTTGGC GCGCCGCCTG TTGCCGGTTC TGACGGCTGA TCAGGCGGCG
GCAGCCATTG TGCGTGGGAT TGAACACGGC AGGCGTGAGA TCGTGCTGCC GGGCATGCTG
CGCCTGCTCT ACGCTGCCTA TGCCATCGCT CCGGGTCTGG TTCAATACCT GACGATCCTG
ACCGGTGCTC GCCATGACCG ACGACCATGA
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| Protein sequence | MRNIQKTIVL ITGASYGIGA ATARAFGRRG AHVLLLARTQ SALEDVARDI RASGGAASVY
PVDLTDARAV EEVAQQVLAA FGPPDILLSN AGAGRWLFID ETTPDEAVAM MAMPYFAAFS
ITRAFLPSMR ARGRGHLAYV NSPASLVAWP GAAAYTAARW ALRGFVEALR AELHGTRLRV
TTIIPGLVAT TYFEHNPGVL ERVPGLARRL LPVLTADQAA AAIVRGIEHG RREIVLPGML
RLLYAAYAIA PGLVQYLTIL TGARHDRRP
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