Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1155 |
Symbol | glyA |
ID | 5538621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 1494384 |
End bp | 1495694 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640893287 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_001431270 |
Protein GI | 156741141 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTATGC TTCAGACCCT CTGGCGCAGT GATCCTGCCG TTGCGCGCAT TATCGATGGC GAGATGCGCC GTCAGCGCGA CGGATTGGAA CTGATTGCCA GCGAAAACTA TGCCAGTCGC GCCGTGATGG AAGCACAGGG TTCAGCGCTC ACGAACAAAT ATGCCGAAGG ATATCCGGGC GCACGCTACT ACGGCGGCTG CGAATGGGTC GATCAGGTGG AAGACCTGGC GCGCGCGCGG GTCAAAGAGT TGTTCGGCGC AGAATATGCA AATGTGCAGC CGCACTCCGG GTCACAGGCG AACATGGCCG TCTACTTCAC TTTTCTGCGA CCCGGTGATA AGGTGCTCGG CATGAATCTG GCGCACGGCG GGCACCTGAC TCATGGCTCC CCGGTTAACT TTTCGGGTCA GTTGTACACC TTCGTGGCGT ATGGCATCGA TCCCAAGACC GAACGGATCG ATTACGATCA GGTGGCAGAG ATTGCGCGCC GCGAGCGCCC CAAAATGATC ACGGTCGGCG CCAGCGCCTA TTCGCGTGCC ATCGATTTTG CCATCTTCCG TCAGATCGCC GATGAAGTCG GCGCGTTTCT CTTCGCCGAT ATTGCGCACC CTGCCGGGTT GATCGCCAAA GGGTTGCTGC CTAGCCCCAT CCCCTACGCT CACGTCGTTA CCTCGACCAC CCACAAGACG CTGCGCGGGC CACGCGGCGG CATCATCATG ATGGGGAAGG ACTTTGAGAA CCCATTCGGG TTGAAGGCAG CGAAGAGCGG TCGCACCCTG ATGATGTCGG AACTGCTCGA CAAAATGGTC ATCCCCGGTG TGCAGGGCGG TCCCTTGATG CACGTCATCG CTGCCAAAGC GGTCGGATTC GGCGAAAACC TGCAACCGGA GTTCGAGACG TATGCCCGTC AGATTATCCG CAATGCGCAG ACACTGGCAG GCGCCCTGAT GGCGCGTGGA TACCACATCC TCTCCGGCGG CACCGACAAC CACCTGATGC TTATCGACCT GCGCAACAAG GGAGTGAGCG GCAAGGCGGC GCAGGAGGCG CTCGACCGCG CCGCCATCAC GACCAATAAG AATGCCGTCC CCAACGACGA CAAATCGCCA TTGATCACCA GTGGCATTCG GCTGGGAACC CCTGCACTGA CCACCCGCGG CATGAAGGAA CCGGAGATGG AACAGATTGC GGCACTGATC GACGATGTCA TCACGCATAT CAATGACGAT CATACCATCA ATCGGGTGCG CGAAGAGGTG TTCGCGCTCT GCGCGCGCTT CCCGGTGCCG GGGCTGGAAC CATCCGCCTG A
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Protein sequence | MSMLQTLWRS DPAVARIIDG EMRRQRDGLE LIASENYASR AVMEAQGSAL TNKYAEGYPG ARYYGGCEWV DQVEDLARAR VKELFGAEYA NVQPHSGSQA NMAVYFTFLR PGDKVLGMNL AHGGHLTHGS PVNFSGQLYT FVAYGIDPKT ERIDYDQVAE IARRERPKMI TVGASAYSRA IDFAIFRQIA DEVGAFLFAD IAHPAGLIAK GLLPSPIPYA HVVTSTTHKT LRGPRGGIIM MGKDFENPFG LKAAKSGRTL MMSELLDKMV IPGVQGGPLM HVIAAKAVGF GENLQPEFET YARQIIRNAQ TLAGALMARG YHILSGGTDN HLMLIDLRNK GVSGKAAQEA LDRAAITTNK NAVPNDDKSP LITSGIRLGT PALTTRGMKE PEMEQIAALI DDVITHINDD HTINRVREEV FALCARFPVP GLEPSA
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