Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1133 |
Symbol | |
ID | 5538599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 1468116 |
End bp | 1468430 |
Gene Length | 315 bp |
Protein Length | 104 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640893267 |
Product | hypothetical protein |
Protein accession | YP_001431250 |
Protein GI | 156741121 |
COG category | [K] Transcription |
COG ID | [COG2740] Predicted nucleic-acid-binding protein implicated in transcription termination |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000628403 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.789236 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAAAA AAAAGCAGAA GGGACCGCGC CCAAAGCATG TGCCGCAGCG CACATGTGTG GTGTGTCGTT GCACCCATGC GAAACGCGCG CTGATTCGCC TGGTGCGCGA TGCCGATGGT CGGGTGCATG TCGATCCAAC CGGGAAGCGC AATGGGCGTG GCGCTTATCT GTGTCACAAC TCTGAGTGCT GGAATCAGGC GATCCGGCGC GGTGCGCTGG CGCGCGCGCT GCGGATCGAC GCGTTGCATC CGGATGATAG TGCGGCGCTT GAAGCATATG CGCGAGCGTT GACGCCGTTG ACGATTGCAG AATAG
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Protein sequence | MPKKKQKGPR PKHVPQRTCV VCRCTHAKRA LIRLVRDADG RVHVDPTGKR NGRGAYLCHN SECWNQAIRR GALARALRID ALHPDDSAAL EAYARALTPL TIAE
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