Gene Rcas_1131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1131 
Symbol 
ID5538597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1465394 
End bp1465786 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content60% 
IMG OID640893265 
Productribosome-binding factor A 
Protein accessionYP_001431248 
Protein GI156741119 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0858] Ribosome-binding factor A 
TIGRFAM ID[TIGR00082] ribosome-binding factor A 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0305445 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAC GCACCGAACA ACTGGGGCAC GAAATACAGC GCATTCTGGG AGAGATCCTT 
CAGTATGAAC TGAAGGATCC ACGGGTTGGT TTCGCAACGG TCGTCGGCGT CGAGGTGACC
GCCGATTTGC AGATCGCGCG GGTGCGGATC TCGGTCATGG GCACACCGGA GGAGCGTAAG
GAAACCATGG CGGCGCTCGA ACGCGCGAAA GGGTTCCTGC GCCGGCGCCT CGCGGAGGAG
TTGAATTATT TGCGCTTTGT TCCAGAATTG CGACTGATCC TCGATACGTC GGTCGATTAT
AGTCTGCATA TCGATGAATT GCTCCGGCGC GCCGCCGCTG AGCGCGCCGG TTCTCCGCCA
CCTCAGCCCG AAGACGACAA ACCGGCGGAG TAG
 
Protein sequence
MSKRTEQLGH EIQRILGEIL QYELKDPRVG FATVVGVEVT ADLQIARVRI SVMGTPEERK 
ETMAALERAK GFLRRRLAEE LNYLRFVPEL RLILDTSVDY SLHIDELLRR AAAERAGSPP
PQPEDDKPAE