| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1118 |
|---|
| Symbol | |
|---|
| ID | 5538584 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 1452241 |
|---|
| End bp | 1452681 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640893252 |
|---|
| Product | putative anti-sigma regulatory factor, serine/threonine protein kinase |
|---|
| Protein accession | YP_001431235 |
|---|
| Protein GI | 156741106 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.227108 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCTGATTG AAGCATACGT CGCCACACAG ACAATCGATG AAGGACTTGA TGCGCTCCAC
GACATGATCG ACCGCTTCTG GGACGACGCT GCGCGCATTG ATCGATTGCC CTCCGATAGA
TGGCGACACC TTTTCACAAT GGCGCTAGCA GAAGTGGCAG CAAACGGGTT ACGTCACGCC
TATCCGCCCG ATGCCGCCGA GCGACCGTTA CGGGTGCGGC TGCGCCTTTT TCCCGATCGC
ATCGAGGCGT TGCTGATCGA TCAGGGCGTG CCCTACCAAC CAATCGCTTC CGCTCCCCAC
GCGCTCGACG ACGAAACCGA CATCGCTCTG CTGCCAGAAG GCGGGTATGG GCTGTTCATC
GCGCGTTCGG CGCTCGAATC GCTGCGTTAC CGTCGCACCC GCAGTGGGTA CAACTGCTGG
AAGCTGGTCA AAAAAATATA G
|
|---|
| Protein sequence | MLIEAYVATQ TIDEGLDALH DMIDRFWDDA ARIDRLPSDR WRHLFTMALA EVAANGLRHA
YPPDAAERPL RVRLRLFPDR IEALLIDQGV PYQPIASAPH ALDDETDIAL LPEGGYGLFI
ARSALESLRY RRTRSGYNCW KLVKKI
|
|---|
| |