| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1109 |
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| Symbol | |
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| ID | 5538575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1435571 |
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| End bp | 1436737 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640893243 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001431226 |
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| Protein GI | 156741097 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.168915 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTACG ACCTTCCCGA AGATCTCCGG CTCTTGCGGC AGACCGTCCG CGACTTCGCC
AACAAGGAGA TCGCCCCAAT CGCCCGTGAA ATCGATGAAG AGGAGCGGGT TCCGTTCGAG
ATGCTGCGCA AAGCTGCCGA TCTTGGTCTG CTCGGCGTCC CCTTTCCCGA AGAGTACGGC
GGCTCCGAAG CCGGGATTAC CGGCTACTGC GTGTTGCTGG AAGAGGTCAA CCGGAAGTGC
GCCTCTACCG GCACGATTAT CGGCGCGCAC ACACAACTCT GCTCCATGTC GATCCATCTC
GCCGGGACTC CCGACCAGAA GGAACGCTAC CTGCGCCCGC TGATCGAGGG ACGTATGTGG
GGCGCATGGG CGCTGACTGA GCCGAATGCG GGCAGTGACG CCGCCCACAT CCGCACGACT
GCTGTGCGCG ACGGCGACTC CTGGGTGCTC AACGGCGGCA AGATGTGGAT CACCAACGGC
TCGTTTGCTG ATGTGATTGT GGTGTTTGCC AATACCGATC CAAGCCTCGG ACCGCGCGGC
ATCACTGCGT TCATCGTCGA GAAGGGTTTC CCTGGCTTCA AGGTGGGCAA AGTTGAGCCG
AAGATGGGGT TGCGCGCGTC GCACACGGCA TCGATCTTCT TCGAGGATTG TCGCGTTCCG
GCAGCAAATG TGCTCGGCGA AGTCGGGCGC GGGTATGCGC TGGCGCTCCA GACGCTCGAC
ATCGGGCGGT GCGGACTGGG CGCGGCGTGT CTGGGAGCGG CGAAAGAAGC GTATGAATTG
TCGCTCAAGT ATGCCGTCGA GCGGCAACAG TTCGGTCGTC CAATCGCCGA TTTCCAGGCA
ATTCAGTTCA AACTGGCGGA TATGGCGGTG AAAATCTACA CGATGGAGCA GATCGTGTAC
GATTGCGCAA AGAAGGTGGA TCGCGGCGAG ACGGCGCGGC TGGAGTCGAG CATTGTCAAA
CTCTACTGCA CCGATGCGCT GGCATGGATC CTCGACGAAG CCATTCAAAT CCACGGTGGC
ATGGGATTCT CGCGTGAACT GCCGCTCGAA CGCATGTACC GCGATGCGCG CGTCTTCCGC
ATCTACGAGG GAACCAACGA GATTCAGCGG TATGTCATCG CCAGTGAACT CCTGAAGACG
GTCGGGCACA AGGTGCGGCT GTACTGA
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| Protein sequence | MEYDLPEDLR LLRQTVRDFA NKEIAPIARE IDEEERVPFE MLRKAADLGL LGVPFPEEYG
GSEAGITGYC VLLEEVNRKC ASTGTIIGAH TQLCSMSIHL AGTPDQKERY LRPLIEGRMW
GAWALTEPNA GSDAAHIRTT AVRDGDSWVL NGGKMWITNG SFADVIVVFA NTDPSLGPRG
ITAFIVEKGF PGFKVGKVEP KMGLRASHTA SIFFEDCRVP AANVLGEVGR GYALALQTLD
IGRCGLGAAC LGAAKEAYEL SLKYAVERQQ FGRPIADFQA IQFKLADMAV KIYTMEQIVY
DCAKKVDRGE TARLESSIVK LYCTDALAWI LDEAIQIHGG MGFSRELPLE RMYRDARVFR
IYEGTNEIQR YVIASELLKT VGHKVRLY
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