Gene Rcas_1096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1096 
Symbol 
ID5538562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1419257 
End bp1420519 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content61% 
IMG OID640893230 
Productcell division protein FtsW 
Protein accessionYP_001431213 
Protein GI156741084 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0772] Bacterial cell division membrane protein 
TIGRFAM ID[TIGR02614] cell division protein FtsW 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAAA CGCGCCAACG GAAACCCGAC TATCTCTTGC TCGCTGCGGT TGGGACTCTG 
GTGCTATTAG GGCTGGTCAT GGTCTACAGC GCGTCATTTA TGCGCGCCTA CGCCGACACC
GGCGATCAAC TCTACTATAC CTGGCGCCAG ATGAATGCTG CGGTGATCGG CGCGGTCGCG
CTGCTGGCGG CGCACCGTAT CGATTACCGG GTCTGGCGGC GTTTTTCGGT GCATCTGATG
GCAGGCACAC TCTTTTTGCT GGCGCTGACG CTGATCCTGC CCGCTTCGAT GACCGAAGCG
AACGGTGCGC GCAGTTGGAT CCGTATCGGC GCCTTCAGTG TGCAACCGTC GGAGATCGCC
AAACTGACGA TGGTCATCTA CTTTGCCGAC TGGCTCTCGC GGCGCGGCGA GAAACTGACG
AACGTCACCT ATGGACTGGC GCCGTTCGCG CTTATGCTCG GCGTGGTGTG CGGTTTAGTG
ATGCTGGGGC GCGACTTGGG GACAACGATT GTGCTTGTCG TGATTGCCGG CATGGTCTAC
TTTGCCGCTG GCGCCAACCT GCTGCACATC ATCGGTGCGG CGATTGTGGC GGGCAGCGCC
TTCTGGGGGC TAATCAACAT CGCTGCCTAC CGCCAGGAGC GCATCGCCGC CTGGATCGAC
CCGTTTGCGC ACTATCAGGG GGCGGGGTAT CAACCGGTTC ACGCGCTCTA TGCGCTGGGC
AGCGGCGGAT TGTTCGGCGT CGGAATCGGG CAGGCGCGCC AGAAGTTCTT CTGGCTGCCC
GAAGCGCACA CCGATGCTAT CTTTGCCATT ATCGGCGAAG AGTTCGGTCT GATCGGGACG
CTATTCGTTG TTACCTGTTT TCTGGTGATC GCCTATCGTG GTATGCGCAT TGCCGGGCGT
TCGTCCGATC CTTTTGCCGC GCTGCTCGCA ACCGGGATTA CATGCTGGCT GGTGTTCCAG
GCGCTGATCA ATATTGCGGT GGTCACGACC CTTCTTCCGT TTACCGGGTT GACATTGCCA
TTCATCAGTT ATGGCGGCAC ATCACTGGCT GCATGTATGG CAGCGGCCGG GATCCTGTTG
AATATTTCGC GCCATACCGG CGCCACATCT CCTGGTGTGT CGTATGAAAC GGTCACTCGA
TCCGGGCGCT CAGAGTCCTT TGCGCGTCTG GCTGGTTGGT GGCGGAACCG GGGGCCACGT
CTATCCGGCG TTGGCCGTCG CCGCGGCGCT CAACGCGCCT GGGGCGCTAT CCGCCGCCGT
TGA
 
Protein sequence
MTETRQRKPD YLLLAAVGTL VLLGLVMVYS ASFMRAYADT GDQLYYTWRQ MNAAVIGAVA 
LLAAHRIDYR VWRRFSVHLM AGTLFLLALT LILPASMTEA NGARSWIRIG AFSVQPSEIA
KLTMVIYFAD WLSRRGEKLT NVTYGLAPFA LMLGVVCGLV MLGRDLGTTI VLVVIAGMVY
FAAGANLLHI IGAAIVAGSA FWGLINIAAY RQERIAAWID PFAHYQGAGY QPVHALYALG
SGGLFGVGIG QARQKFFWLP EAHTDAIFAI IGEEFGLIGT LFVVTCFLVI AYRGMRIAGR
SSDPFAALLA TGITCWLVFQ ALINIAVVTT LLPFTGLTLP FISYGGTSLA ACMAAAGILL
NISRHTGATS PGVSYETVTR SGRSESFARL AGWWRNRGPR LSGVGRRRGA QRAWGAIRRR