| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1090 |
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| Symbol | |
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| ID | 5538556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1412674 |
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| End bp | 1413789 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640893224 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_001431207 |
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| Protein GI | 156741078 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGCA AAGTGCGAGT GGGAGTCCTG TTCGGCGGGC AATCGGGCGA ACACGAGGTG
TCGCTGGTCT CAGCGCGCGC GGTCATGGAT GGTCTCGACC CTGAACGATA TGATGTGACA
CCAATCGGCA TCACGAAGCA CGGGCGCTGG ATCATTGCCC CCGACGCGCA TACCCGTCTG
TTGGCGCAGG CCGATCCGGC AAAGTTGCCG GGAGGATCGT CTGCCGGTGC TGCTGATGCA
GCGGATGGCG TTGACGATGT GGAGACCACC GATCCGCTGA CCCTGATGGT TGCCGGTGAA
CAGTCACCCC TCAAAACGCT CGATGTCGTT TTTCCGGTCC TCCATGGACC GATGGGGGAA
GATGGAACGG TGCAGGGGTT GCTGGAATTG ATGGAAATCC CGTATGTTGG CTGCGGCGTC
ATGGCATCGG CAGTCGGCAT GGACAAAGCG ATGACGAAGG TTGCCTTTTC CGGCGCGGGG
TTGCCGGTGT TGCCCTGGCT GCTCATTCGA CGGCGCGAAT GGGAACGCGA ACCGGCACAC
GTGCTCGACT GGGTCGAACA GCGCCTCACC TACCCGATGT TCGTCAAGCC GGCAAACCTG
GGGTCGAGCG TCGGGATCAG TAAGGTGACC GGTCGCGCGG CGCTTGCGCG CGGCATCGCC
GAAGCTGCGG CGTATGATCG GCGGATCGTC GTTGAACAGG GTATTCCCGC GCGCGAGATC
GAAGTCAGTA TCCTGGGTAA CAATGAACCG GAAGCCAGCG TTCCCGGCGA AGTGGTTCCT
TCCGGCGAAT GGTACGACTA TGAAGCAAAA TACCTGAGCG GCGCATCGAA GATACTCATT
CCTGCGCCGA TCACGCTCGA ACTCGCGGCA CGGGTGCGGC GCCTGGCAGT GCAGGCGTTC
AAAGCCATCG ATGGCGCCGG GCTGGCGCGC GTCGATTTTC TGCTCAACCG CGAGACTGGC
GACCTGTATC TGAACGAGAT CAATACCATG CCCGGCTTTA CCCCGGTGAG CATGTACGCC
ATGATGTGGG AAGCCAGCGG TCTCCCCTAC ACCCAACTGC TCGACCGCCT GATCGAACTG
GCGCTCGAAC GGCGCGGCAG AGGGCGATAT GCGTAA
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| Protein sequence | MTRKVRVGVL FGGQSGEHEV SLVSARAVMD GLDPERYDVT PIGITKHGRW IIAPDAHTRL
LAQADPAKLP GGSSAGAADA ADGVDDVETT DPLTLMVAGE QSPLKTLDVV FPVLHGPMGE
DGTVQGLLEL MEIPYVGCGV MASAVGMDKA MTKVAFSGAG LPVLPWLLIR RREWEREPAH
VLDWVEQRLT YPMFVKPANL GSSVGISKVT GRAALARGIA EAAAYDRRIV VEQGIPAREI
EVSILGNNEP EASVPGEVVP SGEWYDYEAK YLSGASKILI PAPITLELAA RVRRLAVQAF
KAIDGAGLAR VDFLLNRETG DLYLNEINTM PGFTPVSMYA MMWEASGLPY TQLLDRLIEL
ALERRGRGRY A
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