Gene Rcas_1087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1087 
Symbol 
ID5538553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1409381 
End bp1410574 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content61% 
IMG OID640893221 
Productcell division protein FtsZ 
Protein accessionYP_001431204 
Protein GI156741075 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0206] Cell division GTPase 
TIGRFAM ID[TIGR00065] cell division protein FtsZ 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.148902 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATT ACACCAGTCT GAGTCAGGCC GCAGAGAACT TCGCGGTCAT CAAGGTGGTC 
GGCGTCGGCG GCGGCGGATC CAACGCCGTT GATCGCATGG TCGACGAAGG CGTGCATGGT
ATCGAGTTCA TCACCATCAA TACCGACGCA CAGGCGTTGC TGCACTCGCG CGCATCGACC
CGCATTCGGA TCGGCGACAA ACTCACCAAA GGGCTTGGTT CGGGCGGCAA CCCGGTCATC
GGGCAGAAAG CCGCCGAGGA AACGACTGAA GAGATCTACG AGGCGCTCAA GGGCGCCGAT
ATGGTCTTCA TCACCGCAGG CATGGGGGGC GGCACCGGCA CCGGCGCCTC GCCGGTGATT
GCCAGCATCG CACAGGATTT GGGAATGCTC ACGGTCGGCG TGGTGACGAA GCCGTTCAGC
TTCGAAGGCA ACCATCGCCG CAAGACTGCC GAACAGGGCA TCGAGCAACT GCGCCCGATG
GTTGACACCC TGATCGTCAT TCCCAATGAC CGGCTCTTGC AGACGGCAAG CAAGAATACG
TCGATGCTCC AGGCGTTTCA GATGGCGGAC AACGTGCTGC GCCAGGGCAT TCAGGGCATT
TCGGACCTGA TCACGCAGCG CGGGTTGATC AACGTCGATT TTGCCGACGT GAAGACCATC
ATGGCGCGCC AGGGATCGGC GCTTATGGCG ATCGGCATCG GCAGCGGCGA CAACCGCATG
GTCGATGCCG TCAACGAAGC CATTGCTTCG CCTCTGCTCG AAGTATCGAT CGATGGCGCG
AAGGGTGTAC TGTTCAACGT GACCGGCGGT GAAGACCTTG GCATTCTGGA AGTGTACGAA
GCGGCGGATA TCGTAGCCAA GGCAGTGGAC CCGGAGGCGA ACATTATCTT TGGCGCAGTG
ATCGATCCGA CCTTTCCGCC TGGACAGGTG AAGATCACGC TTATTGCCAC CGGCTTCGAC
GCCAGCCGTC CGACGGATGC GCGTAAGCGC ATCTATATGT CCGGCGCGCA ACAGCAACAG
CCTGCCCAAC CGAAGCGTGA CATGGCATAT GCGGAACCGC ACCCGCCGGC CGCGCCGCAG
ACCGCAGCAA CGCGACCGCA ACCACCGCAA CCTGCGCGGT CGCAAGGCGC CCATATCAGC
CCCGACGACC TGGATATCCC GCCGTTCCTG CGCAACCGCC GAAAGAACGG GTAA
 
Protein sequence
MIDYTSLSQA AENFAVIKVV GVGGGGSNAV DRMVDEGVHG IEFITINTDA QALLHSRAST 
RIRIGDKLTK GLGSGGNPVI GQKAAEETTE EIYEALKGAD MVFITAGMGG GTGTGASPVI
ASIAQDLGML TVGVVTKPFS FEGNHRRKTA EQGIEQLRPM VDTLIVIPND RLLQTASKNT
SMLQAFQMAD NVLRQGIQGI SDLITQRGLI NVDFADVKTI MARQGSALMA IGIGSGDNRM
VDAVNEAIAS PLLEVSIDGA KGVLFNVTGG EDLGILEVYE AADIVAKAVD PEANIIFGAV
IDPTFPPGQV KITLIATGFD ASRPTDARKR IYMSGAQQQQ PAQPKRDMAY AEPHPPAAPQ
TAATRPQPPQ PARSQGAHIS PDDLDIPPFL RNRRKNG