| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1073 |
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| Symbol | |
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| ID | 5538539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1390595 |
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| End bp | 1391752 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640893209 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001431192 |
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| Protein GI | 156741063 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACCTC AAACCGCTGA TGTTGTCATT ATCGGCGCCG GTATCATTGG CGCCTCAATC
GCCTACCATC TGGCAGTACG CGGTTGCACC AACGTTGTGA TTCTGGAAAA GGAAGAGACC
GAGATCAGCG GTTCGACCGC CCGATCAGCC GCTGGTGTAC GCCATCAGTT TTCCACCGAA
GTCAATATCC GATTGTCGCT CTACAGCATC GAGCGCCTGA AACACTTCAC CGACGAAGTT
GGCGGGCATT CAGGCTTGCA GCAGATCGGC TATCTCTTCC TGATCGACAA TCAGACAGAC
TGGGAAACCT ACCGCGCCAA TGTGGCGCTC CAGCGCAGCC TGGGGGTGCG CGTCGAATTG
CTCTCGCCGG AAGAAGCCGG GCGCTTTATT CCCGGCATGC GCACCGACGA TCTGATCGGC
GCAACCTTTG GTCCCGACGA CGGGTTTTGC GATCCGCATG GTATCGCCAT CGGATACCTG
AACCGCGCGC GTGAGCTTGG CGTCGCGCTA GAGCGCGCTA CACCGGCCAT CGGCATCCGG
GTTGTTGGCG ATCACGTCGC GGGGGTCGAA ACGCCAACCG GCGTCATCAA TTGCCCGATT
GTCGTAAACG CCGCCGGACC ATGGGCAGGC GAAGTGGGGA TGCTCGCAGG CCTGGAGATA
CCGGTGCGCC CATACCGCCG CTGCATTTAC GTCACCGAAC CGTTCCCCGC TATTCCGGGA
CCGATCCCGT TGACCATCGA TGTCGGCACC GGCTTCTATA TGCGCAAAGA ACACGAGAAT
GTATTATTCG GCAAATCGAA CTACGCCGAA CCGCCGGGGT ATAACCTGGC GGTCGACTGG
GAATGGCTCG ACACCGTCCT CGAAGCCGGA TTACGACGCT TCCCGATCCT GGAACGCGCC
GGGCTGGCGG AAAAACTCTG CTGGGCGGGC GCGTATGAGA TCACGCCCGA TCATATGCCG
ATTCTGGGGA AACATCCCGA ACTTGAAGGG TATGTCGATG CCAGTGGATT CAGCGGGCAC
GGCATCATGC ATGCGCCGGC CACCGGTCTG CTGATTGCCG AAGAGATTCT CGACGGACGC
GCCCACACGA TCGACATCGA CCCGCTGCGC ATCAACCGCT TCCGCGGCGT CTTGCGCCGT
GAACTGAACG TCATCTAA
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| Protein sequence | MPPQTADVVI IGAGIIGASI AYHLAVRGCT NVVILEKEET EISGSTARSA AGVRHQFSTE
VNIRLSLYSI ERLKHFTDEV GGHSGLQQIG YLFLIDNQTD WETYRANVAL QRSLGVRVEL
LSPEEAGRFI PGMRTDDLIG ATFGPDDGFC DPHGIAIGYL NRARELGVAL ERATPAIGIR
VVGDHVAGVE TPTGVINCPI VVNAAGPWAG EVGMLAGLEI PVRPYRRCIY VTEPFPAIPG
PIPLTIDVGT GFYMRKEHEN VLFGKSNYAE PPGYNLAVDW EWLDTVLEAG LRRFPILERA
GLAEKLCWAG AYEITPDHMP ILGKHPELEG YVDASGFSGH GIMHAPATGL LIAEEILDGR
AHTIDIDPLR INRFRGVLRR ELNVI
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