| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1067 |
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| Symbol | |
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| ID | 5538533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1385219 |
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| End bp | 1385854 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640893203 |
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| Product | pyridoxamine 5'-phosphate oxidase |
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| Protein accession | YP_001431186 |
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| Protein GI | 156741057 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0259] Pyridoxamine-phosphate oxidase |
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| TIGRFAM ID | [TIGR00558] pyridoxamine-phosphate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTATCG CCGATCTCCG CAAAGACTAC ACACGACACG GGTTGAGCGA GTCCGACGTT
GACACCGATC CATTGGCACA GTTTCAGCGC TGGTTCGACC AGGCGGTCGG CGCAGGATTG
ATCGAACCAA ACGCCATGAC CCTGGCGACT GCCACGCCCG ATGGCAAACC CTCGGCGCGG
ATGGTGCTCC TCAAGGGCGT CGATGCTGGC GGGTTCGTCT TTTTCACCAA CTATGAGAGC
CGGAAGGGAA TGGAACTGGC AGCAAACCCA TGGGCGGCGC TCGTGTTCTA CTGGCCCGAG
CTGGAGCGGC AGGTGCGCAT CGAGGGGCGC GTCGAGCGCC TCTCACCCGC AGAATCCGAC
GCCTACTTCG CCTCACGACC GAACGGCAGC CGCATCGGTG CGTGGGCGTC CCGCCAAAGC
AGCGTCATTG GCAGCCGCAC GGAACTGGAA CAGCGCGTCG CCGAACTGGA ACAATTCTAC
GCCAACCGCG AGGTCCCGCG CCCGCCATTC TGGGGCGGCT TCCGCGTCCT TCCCGATACC
ATCGAATTCT GGCAGGGACG ACCGAATCGG CTGCATGACC GTTTGCGCTA CCGGCGTGAC
GCCGGTCGCT GGATTATCGA ACGTTTATCG CCATAG
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| Protein sequence | MSIADLRKDY TRHGLSESDV DTDPLAQFQR WFDQAVGAGL IEPNAMTLAT ATPDGKPSAR
MVLLKGVDAG GFVFFTNYES RKGMELAANP WAALVFYWPE LERQVRIEGR VERLSPAESD
AYFASRPNGS RIGAWASRQS SVIGSRTELE QRVAELEQFY ANREVPRPPF WGGFRVLPDT
IEFWQGRPNR LHDRLRYRRD AGRWIIERLS P
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