| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1063 |
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| Symbol | |
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| ID | 5538529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1379868 |
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| End bp | 1380887 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640893199 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_001431182 |
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| Protein GI | 156741053 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACAAC CGTTGCTCGT CGTCAAGAAC CTTGAGACCC AGTTCAAGAC CCAGGACGGC
ATCGTCAAAG CTGTCAACAA TGTCTCCTTT CATGTCGATC GCGGTGAGAC TCTCGGCATC
GTCGGCGAGA GCGGTTCGGG GAAGAGCGTC ACCTCGCTCT CGATTATGCG CCTCATTCCC
AACCCTCCGG GGAAGATCGT CGGTGGACAG ATTATCTTCG ATGGCGAGAA CCTGCTTGAT
TATACCGACG AAGAGATGCG CCACATTCGC GGCAACCGGA TTGCGATGAT TTTCCAGGAC
CCAATGACAT CACTCAATCC GGTGCTGACA ATCGGGCGGC AGATCACCGA GTCGCTCGAA
CTTCATATGA AATTGACTCC GCGCGAGGCG CGTAAACGGG CAATTGAGCT GTTGCAGATG
GTCGGCATCC CCAGCGCTGA ACGCCGACTC GATGACTACC CGCACCAGTT TTCCGGCGGA
ATGCGGCAGC GCGTCATGAT TGCGATGGCG CTGTCGTGCA ACCCGGAACT GCTGATTGCC
GATGAGCCGA CGACTGCGCT CGACGTGACG ATCCAGGCGC AGATTCTCGA ACTCATTCAA
CGGTTGCAAC ACGAACTCGG CACAGCCGTC ATTATTATCA CTCACGACCT TGGGGTCGTC
GCCGGCATGG CCGACCGGGT GGTGGTGATG TATGCCGGGC GGATTGTGGA AGAGGGACCT
ACCGACGAGA TTTTTGCCCG TCCACGCATG CCGTATACCA TTGGTCTGTT GCGCTCGATC
CCGCGCCTTG ATGAGGACGA AGATCGGAAG TTGACGCCGA TTCGCGGTCT GCCGCCGGAC
CTGATCAATC TGCCGCAGAT CTGTCCGTTT AGCCCGCGTT GCGATTATTT CATTCCCGGC
AAATGCGACC AGCAGGTCCC GCCGTTGCGC GAGGTTGTTC CCGGTCATAA GGCGGCCTGC
CTGTTTGATA TTACGCTTGA GACGCCGCTC CCCATCACCG GCGATGAAGT GCCGGCGTAG
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| Protein sequence | MSQPLLVVKN LETQFKTQDG IVKAVNNVSF HVDRGETLGI VGESGSGKSV TSLSIMRLIP
NPPGKIVGGQ IIFDGENLLD YTDEEMRHIR GNRIAMIFQD PMTSLNPVLT IGRQITESLE
LHMKLTPREA RKRAIELLQM VGIPSAERRL DDYPHQFSGG MRQRVMIAMA LSCNPELLIA
DEPTTALDVT IQAQILELIQ RLQHELGTAV IIITHDLGVV AGMADRVVVM YAGRIVEEGP
TDEIFARPRM PYTIGLLRSI PRLDEDEDRK LTPIRGLPPD LINLPQICPF SPRCDYFIPG
KCDQQVPPLR EVVPGHKAAC LFDITLETPL PITGDEVPA
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