| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1060 |
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| Symbol | |
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| ID | 5538526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1376771 |
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| End bp | 1377775 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640893196 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001431179 |
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| Protein GI | 156741050 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTACCA CGACATCGAC ACCGGCGGCG CCTGGCGCTA TCGAGCGATT GCGACCGCGA
TCCGAAGGGC AGTGGGCGGT TGTCTTTCGC CGGTTTCGTC GCCACCGTCT GGCAATGGCG
AGCCTCGCCA TTCTGATCCT TATCTTTACT GCGTCGATCC TGGCGCCATG GATCGCTCCC
TTCCCACGTG ACGATATCGG GCTGAACCGC ACCCGTCTGC CGCCGATGAG CGCCGATCCG
GCGACCGGGC AGATCCATAT CCTCGGCACC GACCATCTGG GACGCGATTT CTTCACCCGC
GTGATCTATG CGGCGCGTGT GTCGCTCATG GTGGCGATTT CGGTGACGAC CCTGGTAGCG
ATCATCGGCA CGACCCTGGG TTTGCTGGCA GGGTTCTTTG GCGGTTGGGT CGATAATACG
ATTAGTCGTG TGATGGAGTT CGTGGCAACA ATCCCGGACC TGCCAATTCT GCTGATCCTC
AGCGCAATTA TGATCCAGAA TGCCGATCTG ATCGTCCTGC CTTCCTGGAT CATCGGTCCG
GTTGCGTGGA TTATGGCGGT GCCGAACCGC GAGGCGACGC AGGTGGCGCT GCTGATCCTG
GTGCTCGCGT CGCTCGGTTG GGTTGGTGTG GCGCGCCTGA TGCGCGGCAT GGTGCTTCAG
GTCCGCGAAA TGCAGTATAT CGAGTCGGCG CGCGCGCTTG GCGGCTCGAA TGCCTGGATT
CTGCTTAAGC ACGTCTTTCC GAATGCCTTC CCGCCGCTGA TTGTGGCGTT TACCCTTGGT
CTCAACGGTG CGCTGGTCAG CGAGGTGGCC ATCAGTTTCC TCGGCTTCGG CGTGCAGGAC
CCGACGCCAA CCTGGGGTAA TATGATGGGT TTTGCCACCA GTTATATGTT CAATCACCCC
TGGATGCCGC TCATTCCTGG GTTGCCGATC TTTCTCTGTT CGCTGGCGTT CAATTTTATT
GGCGATGGGT TGCGTGATGC GCTTGATCCG CGCTTGAAAC TGTAA
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| Protein sequence | MATTTSTPAA PGAIERLRPR SEGQWAVVFR RFRRHRLAMA SLAILILIFT ASILAPWIAP
FPRDDIGLNR TRLPPMSADP ATGQIHILGT DHLGRDFFTR VIYAARVSLM VAISVTTLVA
IIGTTLGLLA GFFGGWVDNT ISRVMEFVAT IPDLPILLIL SAIMIQNADL IVLPSWIIGP
VAWIMAVPNR EATQVALLIL VLASLGWVGV ARLMRGMVLQ VREMQYIESA RALGGSNAWI
LLKHVFPNAF PPLIVAFTLG LNGALVSEVA ISFLGFGVQD PTPTWGNMMG FATSYMFNHP
WMPLIPGLPI FLCSLAFNFI GDGLRDALDP RLKL
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