| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1055 |
|---|
| Symbol | |
|---|
| ID | 5538521 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 1369819 |
|---|
| End bp | 1370346 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640893191 |
|---|
| Product | deaminase-reductase domain-containing protein |
|---|
| Protein accession | YP_001431174 |
|---|
| Protein GI | 156741045 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0262] Dihydrofolate reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.530435 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGACGCA TCCGCTACCA GGTGGTCTGT AGCCTGGATG GCTACATTGC CAGCCCGAAC
GGTGAAGCAG ACTGGGTCCC CAACGAGCCG GACATCGATT TCGCAGCGCT CTTCGCCCAA
TTCGACACGC TGCTCATGGG TCGTAAAACA TACGAAGCGC TGTCGTTGGA CGATCCCGCC
TACGGGCATC TCTTTGCCGA TAAAGAGATC ATCGTGTTTT CTCGCACCCT GCGATTCCAG
GAGCATTCGC GCGCCACGAT CGTCGCCGAA CTGACGTTGA ACTATGTGGA TCAGTTGCGC
AGGCAACCGG GCAGAGACAT CTGGCTGTTC GGCGGGGGTG AACTGTTTCG CGCACTGCTG
GAATTGGAGC GCGTGGATAC GGTGGAACTG GCGATAGCGC CTGTTCTGTT GGACGGCGGC
GCGCCTTTTT TACCCTCTCC CACAGTGCGA CGGCGCCTGA ACCTCATTGA TCAACGGCGC
TGCGAGAAGT CGGGGATTGT GTTGTTGAAC TATGCAGTGG AGTCCTGA
|
|---|
| Protein sequence | MRRIRYQVVC SLDGYIASPN GEADWVPNEP DIDFAALFAQ FDTLLMGRKT YEALSLDDPA
YGHLFADKEI IVFSRTLRFQ EHSRATIVAE LTLNYVDQLR RQPGRDIWLF GGGELFRALL
ELERVDTVEL AIAPVLLDGG APFLPSPTVR RRLNLIDQRR CEKSGIVLLN YAVES
|
|---|
| |