| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1034 |
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| Symbol | |
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| ID | 5538500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1350031 |
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| End bp | 1351377 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640893173 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_001431156 |
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| Protein GI | 156741027 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCACA CGACTCAAGA AGGCATAAAC AACGCACACC TCTGGCCCCT GACGACGGTA
GTCGATATGC ATGGGCGACT GATGATCGGC GGCTGCAATG TGGCGACTCT GGCGCGTCAG
TACGGCACGC CGCTCTACCT GTTCGATGAA GAGACCATTC GCAGCGCCTG CCGCACCTGG
CGAACGGCGC TTGCAGCCTG TTACCGGGGG GAGACGGCAG TTCATTACGC GAGTAAAGCG
TTGCTCAACA CTGCGCTCAC ACACCTGATC GCTGATGAAG GGCTGGGGCT GGACGTAGTC
TCAGGCGGTG AGTTATACGT GGCGCTCCGC GCCGGCTTCC CGCCGCAGCG CATTCATATG
CACGGCAACG CCAAAACGCG CGCCGAACTG GAACAGGCGC TGGCCTCCGG AATCGGACAG
ATCATTGTCG ATAATCTCGA TGAACTGGCG ATGTTGGCGA ACCTGACCGC ATATCGTTCA
CCACCACAAC CGATTGCGTT GCGCATTGCA CCGGATATCG TCACCAATAC GCACGCCCAT
ATTCAAACCG GTCACGCGAC ATCGAAGTTC GGTCTACCAC TTGATGCACT CGATGCCGCC
GCCGAACGGT TACGCACTGC GCCCGGTCTG TGCCTGATCG GGTTACACGC TCATCTCGGG
TCGCAACTCT TCGACCTGGA ACCATATGCC GCTGAGATCG ATACGCTGCT CGACAGCGCC
TCGCGCCTGC GTGATCGCCA CGGTTTCATT ATTCAGCAAA TCAACATCGG CGGAGGAGCA
GGAGTGCCAT ACACTGCGGA TCAGCACCCC TTCGATGTAC ACGCTCTTGC GATGAGATTG
GGAGAAGCGC TCACCGATGA ATGCCGCCGA CGCGGGTTTC CCCTGCTGCA CCTGGTGATC
GAACCAGGAC GTTCAATCAT CGCGCGCGCA GGGGTAGCGC TCTATACGAT TATCGCAACA
AAGAATCTTC CGCATATGCG ATTCCTACAT ATCGACGGCG GCATGGGCGA CAATATTCGT
CCGGCGCTCT ACGGCGCGCG GTATAGTGCG GTGCTGGCAG AACGGGCGAA TGCGCCAATC
GAAGAGAGCG TAGCGATTAC CGGGCGCTAC TGCGAATCGG GCGATGTGTT GATCCATGCC
GCACCGCTCC CGCGCGCCAG CGTTGGCGAC ATTCTGGCAG TTCCTGTGGC GGGCGCCTAC
ACGCTGAGCA TGGCCAGCAC ATACAACCTG ACTCCACGTC CGGCGGTTGT CATGGTGAAT
GGTGGGTCAG TACGTCTCAT TCAGCGCCGC GAAACGTATG AGGATATGAT TGCCAGGGAT
GTGGTGTCGT CGCAGGGGCA GGTCTGA
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| Protein sequence | MNHTTQEGIN NAHLWPLTTV VDMHGRLMIG GCNVATLARQ YGTPLYLFDE ETIRSACRTW
RTALAACYRG ETAVHYASKA LLNTALTHLI ADEGLGLDVV SGGELYVALR AGFPPQRIHM
HGNAKTRAEL EQALASGIGQ IIVDNLDELA MLANLTAYRS PPQPIALRIA PDIVTNTHAH
IQTGHATSKF GLPLDALDAA AERLRTAPGL CLIGLHAHLG SQLFDLEPYA AEIDTLLDSA
SRLRDRHGFI IQQINIGGGA GVPYTADQHP FDVHALAMRL GEALTDECRR RGFPLLHLVI
EPGRSIIARA GVALYTIIAT KNLPHMRFLH IDGGMGDNIR PALYGARYSA VLAERANAPI
EESVAITGRY CESGDVLIHA APLPRASVGD ILAVPVAGAY TLSMASTYNL TPRPAVVMVN
GGSVRLIQRR ETYEDMIARD VVSSQGQV
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